RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 AMZ1Q400G9 498 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 ZACNQ401N2 412 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 ARSIQ5FYB1 569 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 EFHC2Q5JST6 749 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 FAM26FQ5R3K3 315 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 MSANTD2Q6P1R3 559 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 EPM2AIP1Q7L775 607 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 HID1Q8IV36 788 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 SLITRK4Q8IW52 837 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 SFTPA2Q8IWL1 248 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 ANKRD52Q8NB46 1076 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 ART4Q93070 314 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 TSACCQ96A04 125 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 TCTN2Q96GX1 697 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 SLC45A3Q96JT2 553 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 FCRL2Q96LA5 508 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 TAAR9Q96RI9 348 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 IRX2Q9BZI1 471 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 UBXN6Q9BZV1 441 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 IMPG2Q9BZV3 1241 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 DNAI2Q9GZS0 605 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 CDH19Q9H159 772 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 CYP3A43Q9HB55 503 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 NAALADL1Q9UQQ1 740 aa11.28□□□□□ -0.6
CTNNA1-234ENST00000522227 LOC101059948A0A1B0GTJ6 334 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 MKRN2OSH3BPM6 223 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 K7ERQ8 282 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 M0QYT0 321 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 XPO1O14980 1071 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 FGF3P11487 239 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 TACR2P21452 398 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 DAOAP59103 153 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 PFN3P60673 137 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 KRTAP21-3Q3LHN1 58 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 CCDC73Q6ZRK6 1079 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 NYAP1Q6ZVC0 841 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 NRSN1Q8IZ57 195 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 CCAR2Q8N163 923 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 SH2D3CQ8N5H7 860 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 SLC4A11Q8NBS3 891 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 CLEC4CQ8WTT0 213 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 MARVELD3Q96A59 401 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 KIAA1143Q96AT1 154 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 RNF31Q96EP0 1072 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 ZSCAN31Q96LW9 406 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 KLF6Q99612 283 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 NIF3L1Q9GZT8 377 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 TNKS2Q9H2K2 1166 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 TFIP11Q9UBB9 837 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 ERRFI1Q9UJM3 462 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 CSMD1Q96PZ7 3565 aa11.27□□□□□ -0.61
CTNNA1-234ENST00000522227 BMP15O95972 392 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 MT-CO1P00395 513 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 TCN2P20062 427 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 PDCP20941 246 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 NEK3P51956 506 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 SLC12A1Q13621 1099 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 ARHGEF7Q14155 803 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 ELOCQ15369 112 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 PRR30Q53SZ7 412 aaPredicted RBP11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 KIAA1161Q6NSJ0 714 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 SPRED1Q7Z699 444 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 VPS36Q86VN1 386 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 CCDC13Q8IYE1 715 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 ATP11CQ8NB49 1132 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 OR52K2Q8NGK3 314 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 OR2A12Q8NGT7 310 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 AZIN2Q96A70 460 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 EPAS1Q99814 870 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 UNKQ9C0B0 810 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 VPS28Q9UK41 221 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 TSPAN16Q9UKR8 245 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 ITM2BQ9Y287 266 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 FADS3Q9Y5Q0 445 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 MRPS18BQ9Y676 258 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 CLIC4Q9Y696 253 aa11.26□□□□□ -0.61
CTNNA1-234ENST00000522227 A0A1B0GTL3 188 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 TCP11X1B4DZS4 312 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 NEMP1O14524 444 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 LEFTY1O75610 366 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 LDLRP01130 860 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 LTFP02788 710 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 PDGFAP04085 211 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 PRNPP04156 253 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 ALPIP09923 528 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 SRCP12931 536 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 ADRB3P13945 408 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 RRM1P23921 792 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 MPSTP25325 297 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 ITGB7P26010 798 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 IGFALSP35858 605 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 EIF4A3P38919 411 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 RECQLP46063 649 aaPredicted RBP11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 RAD23BP54727 409 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 CLDN10P78369 228 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 CENPCQ03188 943 aa11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 ZC3H12AQ5D1E8 599 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 CXorf57Q6NSI4 855 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-234ENST00000522227 TCTN3Q6NUS6 607 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms