RNA–Protein interactions for RNA: ENST00000496805.5

PEF1-208, Transcript of penta-EF-hand domain containing 1, human

TSL 5

Gene PEF1, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PEF1-208	ENST00000496805	LRIG2	O94898	1065 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	ECEL1	O95672	775 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	CKM	P06732	381 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	RHOXF2B	P0C7M4	288 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	PECAM1	P16284	738 aa	Predicted RBP	13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	SLC11A2	P49281	568 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	HARS2	P49590	506 aa	Known RBP	13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	SLC7A9	P82251	487 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	OTUD4	Q01804	1114 aa	Known RBP	13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	CFHR1	Q03591	330 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	BYSL	Q13895	437 aa	Known RBP	13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	HNRNPD	Q14103	355 aa	Known RBP	13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	OASL	Q15646	514 aa	Known RBP	13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	ARHGAP15	Q53QZ3	475 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	C2orf27A	Q580R0	203 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	PIK3R6	Q5UE93	754 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	NCBP2-AS2	Q69YL0	99 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	TTC27	Q6P3X3	843 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	TMCO3	Q6UWJ1	677 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	BZW1	Q7L1Q6	419 aa	Known RBP	13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	TMPRSS7	Q7RTY8	843 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	CCDC33	Q8N5R6	958 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	USP33	Q8TEY7	942 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	AZIN2	Q96A70	460 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	HAUS1	Q96CS2	278 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	FCRL3	Q96P31	734 aa	Predicted RBP	13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	RHOXF2	Q9BQY4	288 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	SLC46A2	Q9BY10	475 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	RAB17	Q9H0T7	212 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	ANKZF1	Q9H8Y5	726 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	TOR4A	Q9NXH8	423 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	DONSON	Q9NYP3	566 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	AMACR	Q9UHK6	382 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	PCDHB9	Q9Y5E1	797 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	HS3ST4	Q9Y661	456 aa		13.2	□□□□□ -0.3
PEF1-208	ENST00000496805	FAM72C	H0Y354	149 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	MAP3K13	O43283	966 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	MFSD11	O43934	449 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	STC2	O76061	302 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	HEXIM1	O94992	359 aa	Known RBP	13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	ITGAV	P06756	1048 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	HMBS	P08397	361 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	SERPINF2	P08697	491 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	MBL2	P11226	248 aa	Predicted RBP	13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	EPHB2	P29323	1055 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	WEE1	P30291	646 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	CAMK2B	Q13554	666 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	PAFAH1B3	Q15102	231 aa	Known RBP	13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	DUOXA1	Q1HG43	343 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	MAP7D1	Q3KQU3	841 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	MS4A13	Q5J8X5	152 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	FAM72A	Q5TYM5	149 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	FAM72D	Q6L9T8	149 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	LRRC31	Q6UY01	552 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	CHSY1	Q86X52	802 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	FAM72B	Q86X60	149 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	JAML	Q86YT9	394 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	SFTPA1	Q8IWL2	248 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	USP13	Q92995	863 aa	Predicted RBP	13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	ZFR	Q96KR1	1074 aa	Known RBP	13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	CCDC114	Q96M63	670 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	DDX50	Q9BQ39	737 aa	Known RBP	13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	LRRC1	Q9BTT6	524 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	KLF16	Q9BXK1	252 aa	Predicted RBP	13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	CATSPERB	Q9H7T0	1116 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	IGSF5	Q9NSI5	407 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	MMP17	Q9ULZ9	603 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	COL12A1	Q99715	3063 aa		13.19	□□□□□ -0.3
PEF1-208	ENST00000496805	IGLV3-10	A0A075B6K4	115 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	CFAP69	A5D8W1	941 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805		E9PAM4	449 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	ARHGAP33	O14559	1287 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	PPP1R12A	O14974	1030 aa	Predicted RBP	13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	TTI1	O43156	1089 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	CBFA2T3	O75081	653 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	ERCC2	P18074	760 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	HDC	P19113	662 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	TNFRSF8	P28908	595 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	CORO1A	P31146	461 aa	Known RBP	13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	GGCX	P38435	758 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	EIF3E	P60228	445 aa	Known RBP	13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	XRCC4	Q13426	336 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	PTK6	Q13882	451 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	CRY1	Q16526	586 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	TXNDC8	Q6A555	127 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	WDR93	Q6P2C0	686 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	ZNF683	Q8IZ20	524 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	ATL2	Q8NHH9	583 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	CCHCR1	Q8TD31	782 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	SPACA7	Q96KW9	195 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	OLFM3	Q96PB7	478 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	PRMT1	Q99873	361 aa	Known RBP	13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	SIK2	Q9H0K1	926 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	RETREG1	Q9H6L5	497 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	ZDHHC4	Q9NPG8	344 aa		13.18	□□□□□ -0.3
PEF1-208	ENST00000496805	XPO7	Q9UIA9	1087 aa	Known RBP	13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms