RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 KCNK10P57789 538 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 PPARDQ03181 441 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 EFEMP1Q12805 493 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 MAPK7Q13164 816 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 MAP7Q14244 749 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 PDLIM3Q53GG5 364 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-206ENST00000471968 LYPLAL1Q5VWZ2 237 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 RNF219Q5W0B1 726 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-206ENST00000471968 MTFR2Q6P444 385 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 BHLHB9Q6PI77 547 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 C16orf47Q6ZP98 133 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-206ENST00000471968 DPH6Q7L8W6 267 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 CUZD1Q86UP6 607 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 GKN2Q86XP6 184 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 FAM217AQ8IXS0 508 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 KDM1BQ8NB78 822 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 GRHL3Q8TE85 626 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 TMA16Q96EY4 203 aaKnown RBP6.74□□□□□ -1.33
HDAC3-206ENST00000471968 RPL10LQ96L21 214 aaKnown RBP6.74□□□□□ -1.33
HDAC3-206ENST00000471968 TRAPPC9Q96Q05 1148 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 SMAD5Q99717 465 aaKnown RBP6.74□□□□□ -1.33
HDAC3-206ENST00000471968 MED10Q9BTT4 135 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 SLC17A9Q9BYT1 436 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 EDEM3Q9BZQ6 932 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 FBXO44Q9H4M3 255 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 ACTL8Q9H568 366 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 DMAP1Q9NPF5 467 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-206ENST00000471968 SH3BGRL2Q9UJC5 107 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 INTS6Q9UL03 887 aaKnown RBP6.74□□□□□ -1.33
HDAC3-206ENST00000471968 PLEKHA6Q9Y2H5 1048 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 FARP1Q9Y4F1 1045 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-206ENST00000471968 NME7Q9Y5B8 376 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 CNTRLQ7Z7A1 2325 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 ITIH6Q6UXX5 1313 aa6.74□□□□□ -1.33
HDAC3-206ENST00000471968 PRKDCP78527 4128 aaKnown RBP6.73□□□□□ -1.33
HDAC3-206ENST00000471968 PP2D1A8MPX8 630 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 B4DGG1 531 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 C1QTNF3-AMACRE9PGA6 284 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 MASP2O00187 686 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 NUDT21O43809 227 aaKnown RBP6.73□□□□□ -1.33
HDAC3-206ENST00000471968 CRLF1O75462 422 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 CD2BP2O95400 341 aaKnown RBP6.73□□□□□ -1.33
HDAC3-206ENST00000471968 SRPRAP08240 638 aaKnown RBP6.73□□□□□ -1.33
HDAC3-206ENST00000471968 WARSP23381 471 aaKnown RBP6.73□□□□□ -1.33
HDAC3-206ENST00000471968 DNASE1P24855 282 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 RPA1P27694 616 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 GNL1P36915 607 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-206ENST00000471968 PTGIRP43119 386 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 STK19P49842 368 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-206ENST00000471968 DGKQP52824 942 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 RCAN1P53805 252 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 SMTNP53814 917 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 PFN3P60673 137 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 MC2RQ01718 297 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 PTK2Q05397 1052 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 DPYDQ12882 1025 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 DNASE1L3Q13609 305 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 LLGL1Q15334 1064 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 UGT8Q16880 541 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 TMEM259Q4ZIN3 620 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 C20orf194Q5TEA3 1177 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 NKAIN2Q5VXU1 208 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 PLEKHA7Q6IQ23 1121 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 PODNL1Q6PEZ8 512 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 C6orf15Q6UXA7 325 aaPredicted RBP6.73□□□□□ -1.33
HDAC3-206ENST00000471968 TADA2BQ86TJ2 420 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 HID1Q8IV36 788 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 GALNT6Q8NCL4 622 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 OR4D9Q8NGE8 314 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 FAR1Q8WVX9 515 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 KCTD13Q8WZ19 329 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 OR8D1Q8WZ84 308 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 MRPL45Q9BRJ2 306 aaKnown RBP6.73□□□□□ -1.33
HDAC3-206ENST00000471968 NTPCRQ9BSD7 190 aaKnown RBP6.73□□□□□ -1.33
HDAC3-206ENST00000471968 PLA2G12AQ9BZM1 189 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 ULBP3Q9BZM4 244 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 LNPKQ9C0E8 428 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 ZMYND15Q9H091 742 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 SNX25Q9H3E2 840 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 C17orf75Q9HAS0 396 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 TMEM9Q9P0T7 183 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 NAGPAQ9UK23 515 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 KCNJ14Q9UNX9 436 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 MAPK8IP1Q9UQF2 711 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 PCDHGA6Q9Y5G7 932 aa6.73□□□□□ -1.33
HDAC3-206ENST00000471968 CACNA1CQ13936 2221 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 TLCD2A6NGC4 264 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 A8MU76 341 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 K7ELQ4 463 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-206ENST00000471968 PROM1O43490 865 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 TBL1XO60907 577 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 JRKO75564 520 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 AP1G2O75843 785 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 REC8O95072 547 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 ZNF18P17022 549 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 ZNF28P17035 718 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 CD1CP29017 333 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 NUMBP49757 651 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 RPS18P62269 152 aaKnown RBP6.72□□□□□ -1.33
HDAC3-206ENST00000471968 ADORA2A-AS1P86434 159 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms