RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 NFKBIEO00221 500 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 TIMM44O43615 452 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 H2AFYO75367 372 aaKnown RBP11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 PGK1P00558 417 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 CYP2B6P20813 491 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 CTBP1Q13363 440 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 TMED1Q13445 227 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 DUS1LQ6P1R4 473 aaKnown RBP11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 TTC39CQ8N584 583 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 LINC01465Q8N7H1 131 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 TSPAN14Q8NG11 270 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 DLG3Q92796 817 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 ITFG2Q969R8 447 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 HSPBAP1Q96EW2 488 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 GPR22Q99680 433 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 CIB1Q99828 191 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 CCT7Q99832 543 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 FTHL17Q9BXU8 183 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 TRPV6Q9H1D0 765 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 OSBPL2Q9H1P3 480 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 ERAP1Q9NZ08 941 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 MRPL42Q9Y6G3 142 aaKnown RBP11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 PDCD11Q14690 1871 aaKnown RBP11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 TARM1B6A8C7 271 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 TRIM38O00635 465 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 SDHDO14521 159 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 TADA2AO75478 443 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 CNMDO75829 334 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 AHSGP02765 367 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 NDST2P52849 883 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 PSME3P61289 254 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 COG7P83436 770 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 CREB5Q02930 508 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 PDAP1Q13442 181 aaKnown RBP11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 VGLL4Q14135 290 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 IKBKEQ14164 716 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 PPP1R3AQ16821 1122 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 HMBOX1Q6NT76 420 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 CNSTQ6PJW8 725 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 LAYNQ6UX15 382 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 PNPLA1Q8N8W4 532 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 RIN3Q8TB24 985 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 USP33Q8TEY7 942 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 STYXQ8WUJ0 223 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 GTSE1Q9NYZ3 720 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 RCOR3Q9P2K3 495 aaPredicted RBP11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 SNX13Q9Y5W8 968 aa11.9□□□□□ -0.51
PDZRN3-203ENST00000462146 ARHGEF37A1IGU5 675 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 CABYRO75952 493 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 LGALS2P05162 132 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 AKAP5P24588 427 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 CSE1LP55060 971 aaKnown RBP11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 ADARP55265 1226 aaKnown RBP11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 SNX16P57768 344 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 SH3D19Q5HYK7 790 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 PITRM1Q5JRX3 1037 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 KLC3Q6P597 504 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 SETD3Q86TU7 594 aaPredicted RBP11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 NT5DC4Q86YG4 428 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 TRIML2Q8N7C3 387 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 DDI1Q8WTU0 396 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 SNRNP27Q8WVK2 155 aaKnown RBP11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 SLC39A3Q9BRY0 314 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 TMEM79Q9BSE2 394 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 AP4S1Q9Y587 144 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 CENPFP49454 3210 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 DNAH12Q6ZR08 3092 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 ARHGAP10A1A4S6 786 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 PRORSD1PA6NEY8 169 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 BTBD19C9JJ37 291 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 FBP2O00757 339 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 DDHD2O94830 711 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 MT-CO1P00395 513 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 CKMT2P17540 419 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 GNL1P36915 607 aaPredicted RBP11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 GRM5P41594 1212 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 STT3AP46977 705 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 RPL34P49207 117 aaKnown RBP11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 HERC3Q15034 1050 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 C9orf57Q5W0N0 161 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 OTOP3Q7RTS5 596 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 TXNDC5Q8NBS9 432 aaKnown RBP11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 LPGAT1Q92604 370 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 ASB9Q96DX5 294 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 NPY6RQ99463 290 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 TRPC7Q9HCX4 862 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 KLK14Q9P0G3 267 aa11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 RSL24D1Q9UHA3 163 aaKnown RBP11.89□□□□□ -0.51
PDZRN3-203ENST00000462146 TMX2-CTNND1H3BSU7 103 aa11.88□□□□□ -0.51
PDZRN3-203ENST00000462146 DAB1O75553 588 aa11.88□□□□□ -0.51
PDZRN3-203ENST00000462146 CYP2C8P10632 490 aa11.88□□□□□ -0.51
PDZRN3-203ENST00000462146 IGFBP6P24592 240 aaPredicted RBP11.88□□□□□ -0.51
PDZRN3-203ENST00000462146 HSPA13P48723 471 aa11.88□□□□□ -0.51
PDZRN3-203ENST00000462146 GJA9P57773 515 aa11.88□□□□□ -0.51
PDZRN3-203ENST00000462146 PPIDQ08752 370 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-203ENST00000462146 RFTN1Q14699 578 aaPredicted RBP11.88□□□□□ -0.51
PDZRN3-203ENST00000462146 CARM1Q86X55 608 aa11.88□□□□□ -0.51
PDZRN3-203ENST00000462146 IFNLR1Q8IU57 520 aaPredicted RBP11.88□□□□□ -0.51
PDZRN3-203ENST00000462146 HERC6Q8IVU3 1022 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms