RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 TPCN2Q8NHX9 752 aa18.4■□□□□ 0.54
CHCHD3-203ENST00000448878 GLMNQ92990 594 aa18.4■□□□□ 0.54
CHCHD3-203ENST00000448878 GRAMD1AQ96CP6 724 aa18.4■□□□□ 0.54
CHCHD3-203ENST00000448878 CPXM1Q96SM3 734 aa18.4■□□□□ 0.54
CHCHD3-203ENST00000448878 FAM117AQ9C073 453 aa18.4■□□□□ 0.54
CHCHD3-203ENST00000448878 TKTL2Q9H0I9 626 aa18.4■□□□□ 0.54
CHCHD3-203ENST00000448878 SYNCQ9H7C4 482 aa18.4■□□□□ 0.54
CHCHD3-203ENST00000448878 SALL4Q9UJQ4 1053 aa18.4■□□□□ 0.54
CHCHD3-203ENST00000448878 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.4■□□□□ 0.54
CHCHD3-203ENST00000448878 SNX10Q9Y5X0 201 aa18.4■□□□□ 0.54
CHCHD3-203ENST00000448878 CSNK1G3Q9Y6M4 447 aa18.4■□□□□ 0.54
CHCHD3-203ENST00000448878 A0A0D9SEW6 157 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 A0A1W2PNU3 283 aaPredicted RBP18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 PMS2P1A4D2B8 440 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 EME2A4GXA9 379 aaPredicted RBP18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 NEMP1O14524 444 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 RAD51BO15315 384 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 ADRB3P13945 408 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 NME1P15531 152 aaKnown RBP18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 CD44P16070 742 aaKnown RBP18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 OR1E1P30953 314 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 RPIAP49247 311 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 CLCN6P51797 869 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 RNASE9P60153 205 aaKnown RBP18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 NFATC3Q12968 1075 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 C1orf61Q13536 156 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 FGL2Q14314 439 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 MEA1Q16626 185 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 C11orf57Q6ZUT1 292 aaPredicted RBP18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 FAM183BPQ6ZVS7 135 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 RYBPQ8N488 228 aaPredicted RBP18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 WDR36Q8NI36 951 aaKnown RBP18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 SNRNP27Q8WVK2 155 aaKnown RBP18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 ASNSD1Q9NWL6 643 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 MPP6Q9NZW5 540 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 KLF15Q9UIH9 416 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 PCDHGA8Q9Y5G5 932 aa18.39■□□□□ 0.53
CHCHD3-203ENST00000448878 SRGAP2O75044 1071 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 NOS2P35228 1153 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 PERM1Q5SV97 790 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 GJB7Q6PEY0 223 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 IGF2-ASQ6U949 168 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 SETD3Q86TU7 594 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 WDTC1Q8N5D0 677 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 DCAF4L2Q8NA75 395 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 OR7D4Q8NG98 312 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 BTN2A2Q8WVV5 523 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 NELFBQ8WX92 580 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 HEPHQ9BQS7 1158 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 ARHGAP9Q9BRR9 750 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 ZDHHC6Q9H6R6 413 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 SPASTQ9UBP0 616 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 FADS3Q9Y5Q0 445 aa18.38■□□□□ 0.53
CHCHD3-203ENST00000448878 IGLON5A6NGN9 336 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 L1CAMP32004 1257 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 PPP1R2P41236 205 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 SULT1E1P49888 294 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 THOP1P52888 689 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 ADKP55263 362 aaKnown RBP18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 STX17P56962 302 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 SNX16P57768 344 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 SPIDRQ14159 915 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 PRRT3Q5FWE3 981 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 RETSATQ6NUM9 610 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 JAMLQ86YT9 394 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 RBFAQ8N0V3 343 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 PRR11Q96HE9 360 aaPredicted RBP18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 CCNL2Q96S94 520 aaPredicted RBP18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 CRACR2AQ9BSW2 395 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 TRIM4Q9C037 500 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 PIGVQ9NUD9 493 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 APOBEC3BQ9UH17 382 aaKnown RBP18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 DOLKQ9UPQ8 538 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 CTNND2Q9UQB3 1225 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 WASF2Q9Y6W5 498 aa18.37■□□□□ 0.53
CHCHD3-203ENST00000448878 BICDL2A1A5D9 508 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 CDRT15L2A8MXV6 281 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 DAB1O75553 588 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 TCEA3O75764 348 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 GNA14O95837 355 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 ERBB2P04626 1255 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 ANXA6P08133 673 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 ITGB7P26010 798 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 SLC6A3Q01959 620 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 DEUP1Q05D60 604 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 CLN3Q13286 438 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 PTK2BQ14289 1009 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 C5orf22Q49AR2 442 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 CARD16Q5EG05 197 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 BRMS1LQ5PSV4 323 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 C6orf132Q5T0Z8 1188 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 FAXCQ5TGI0 409 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 TTI2Q6NXR4 508 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 ENOSF1Q7L5Y1 443 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 TRIM59Q8IWR1 403 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 C1orf131Q8NDD1 294 aaKnown RBP18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 CCDC3Q9BQI4 270 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 ATP13A1Q9HD20 1204 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 GULP1Q9UBP9 304 aa18.36■□□□□ 0.53
CHCHD3-203ENST00000448878 CCDC187A0A096LP49 1063 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms