RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 C8orf59Q8N0T1 100 aaPredicted RBP8.49□□□□□ -1.05
VPS36-201ENST00000378060 PQLC1Q8N2U9 271 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 ANKRD52Q8NB46 1076 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 ADCY4Q8NFM4 1077 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 OR5B17Q8NGF7 314 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 FIG4Q92562 907 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 MTERF3Q96E29 417 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 PLGRKTQ9HBL7 147 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 GBA2Q9HCG7 927 aaPredicted RBP8.49□□□□□ -1.05
VPS36-201ENST00000378060 TLR8Q9NR97 1041 aaKnown RBP8.49□□□□□ -1.05
VPS36-201ENST00000378060 ARL8BQ9NVJ2 186 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 CLIC5Q9NZA1 410 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 TRPM7Q96QT4 1865 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 IRF1P10914 325 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 CRHR1P34998 444 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 GRIA4P48058 902 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 SCNN1BP51168 640 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 GTF2A2P52657 109 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 TNK2Q07912 1038 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 TREML2Q5T2D2 321 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 ZNF280DQ6N043 979 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 RETSATQ6NUM9 610 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 DRICH1Q6PGQ1 229 aaPredicted RBP8.49□□□□□ -1.05
VPS36-201ENST00000378060 FAM183BPQ6ZVS7 135 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 STK40Q8N2I9 435 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 NKAPQ8N5F7 415 aaKnown RBP8.49□□□□□ -1.05
VPS36-201ENST00000378060 STARD8Q92502 1023 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 FAM136AQ96C01 138 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 SHISA4Q96DD7 197 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 GLT1D1Q96MS3 346 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 ZIC5Q96T25 663 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 ACO2Q99798 780 aaKnown RBP8.49□□□□□ -1.05
VPS36-201ENST00000378060 RTKNQ9BST9 563 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 ZFYVE28Q9HCC9 887 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 C8orf4Q9NR00 106 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 KRT84Q9NSB2 600 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 FETUBQ9UGM5 382 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 MYH6P13533 1939 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 HOXA2O43364 376 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 CSPG5O95196 566 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 HOXB6P17509 224 aaKnown RBP8.49□□□□□ -1.05
VPS36-201ENST00000378060 UBA1P22314 1058 aaKnown RBP8.49□□□□□ -1.05
VPS36-201ENST00000378060 HUNKP57058 714 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 NRF1Q16656 503 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 CYP1B1Q16678 543 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 PGS1Q32NB8 556 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 TIMM50Q3ZCQ8 353 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 CTXN3Q4LDR2 81 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 ABRAXAS1Q6UWZ7 409 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 PACS1Q6VY07 963 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 SPATA17Q96L03 361 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 ULBP1Q9BZM6 244 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 SETD4Q9NVD3 440 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 SLC17A7Q9P2U7 560 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 OR12D3Q9UGF7 316 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 LEF1Q9UJU2 399 aaPredicted RBP8.49□□□□□ -1.05
VPS36-201ENST00000378060 ZNF180Q9UJW8 692 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 R3HDM2Q9Y2K5 976 aaKnown RBP8.49□□□□□ -1.05
VPS36-201ENST00000378060 UMODL1Q5DID0 1318 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 PRR5-ARHGAP8B1AHC4 643 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 RGS14O43566 566 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 FAM20BO75063 409 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 PGM3O95394 542 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 TPSB2P20231 275 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 PTGIRP43119 386 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 PLK1P53350 603 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 ARHGAP8P85298 464 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 ATP1A4Q13733 1029 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 TPSAB1Q15661 275 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 SLC1A5Q15758 541 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 NPY5RQ15761 445 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 SPANXN2Q5MJ10 180 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 ARMC4Q5T2S8 1044 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 MILR1Q7Z6M3 343 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 DDX53Q86TM3 631 aaKnown RBP8.49□□□□□ -1.05
VPS36-201ENST00000378060 TMEM132CQ8N3T6 1108 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 HELQQ8TDG4 1101 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 SEMA4DQ92854 862 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 FGFBP2Q9BYJ0 223 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 TKTL2Q9H0I9 626 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 CDT1Q9H211 546 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 RNPEPQ9H4A4 650 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 KRT87PA6NCN2 255 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 SERPINI2O75830 405 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 CALCAP01258 141 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 THPOP40225 353 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 GRIA3P42263 894 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 RAB10P61026 200 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 RAB14P61106 215 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 CNTN2Q02246 1040 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 FOLH1Q04609 750 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 CAPSQ13938 189 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 POTEHQ6S545 545 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 FAM45AQ8TCE6 357 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 ABHD8Q96I13 439 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 UNKQ9C0B0 810 aaKnown RBP8.48□□□□□ -1.05
VPS36-201ENST00000378060 NMUR2Q9GZQ4 415 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 ABHD16BQ9H3Z7 469 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 CYLDQ9NQC7 956 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 DMAC2Q9NW81 257 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms