RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 HPS1Q92902 700 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 NANOGQ9H9S0 305 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 ZBTB26Q9HCK0 441 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 ANK1P16157 1881 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 TCAF2A6NFQ2 919 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 MDM4O15151 490 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 NOL3O60936 208 aaKnown RBP14.87□□□□□ -0.03
TOP3B-201ENST00000357179 RSL1D1O76021 490 aaKnown RBP14.87□□□□□ -0.03
TOP3B-201ENST00000357179 CLPXO76031 633 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 BMP2P12643 396 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 UBA1P22314 1058 aaKnown RBP14.87□□□□□ -0.03
TOP3B-201ENST00000357179 RCVRNP35243 200 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 PRKCQQ04759 706 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 NAB1Q13506 487 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 ATF7IP2Q5U623 682 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 IFNLR1Q8IU57 520 aaPredicted RBP14.87□□□□□ -0.03
TOP3B-201ENST00000357179 UNC5BQ8IZJ1 945 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 PACRGLQ8N7B6 248 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 TTLL6Q8N841 843 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 RNF149Q8NC42 400 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 OTUD5Q96G74 571 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 TUBA1CQ9BQE3 449 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 PCDHAC1Q9H158 963 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 KIAA1257Q9ULG3 409 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 CNOT6Q9ULM6 557 aaKnown RBP14.87□□□□□ -0.03
TOP3B-201ENST00000357179 IGKV6-21A0A0C4DH24 114 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 NEMP1O14524 444 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 BCL10O95999 233 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 MAP4P27816 1152 aaKnown RBP14.87□□□□□ -0.03
TOP3B-201ENST00000357179 TMBIM6P55061 237 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 C15orf59Q2T9L4 293 aaPredicted RBP14.87□□□□□ -0.03
TOP3B-201ENST00000357179 AGAP7PQ5VUJ5 663 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 C1orf127Q8N9H9 656 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 AGR3Q8TD06 166 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 NPAS2Q99743 824 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 FZD8Q9H461 694 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 RPF1Q9H9Y2 349 aaKnown RBP14.87□□□□□ -0.03
TOP3B-201ENST00000357179 PARVBQ9HBI1 364 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 MRPL40Q9NQ50 206 aaKnown RBP14.87□□□□□ -0.03
TOP3B-201ENST00000357179 ZNF358Q9NW07 568 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 ADA2Q9NZK5 511 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 HMGXB4Q9UGU5 601 aa14.87□□□□□ -0.03
TOP3B-201ENST00000357179 HDAC3O15379 428 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 PAPSS1O43252 624 aaPredicted RBP14.86□□□□□ -0.03
TOP3B-201ENST00000357179 HNRNPFP52597 415 aaKnown RBP14.86□□□□□ -0.03
TOP3B-201ENST00000357179 MLLT10P55197 1068 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 TRAP1Q12931 704 aaKnown RBP14.86□□□□□ -0.03
TOP3B-201ENST00000357179 SEMA5AQ13591 1074 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 CCDC14Q49A88 953 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 SMUG1Q53HV7 270 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 IRAK1BP1Q5VVH5 260 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 OR6B2Q6IFH4 312 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 FAM183BPQ6ZVS7 135 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 KCTD8Q6ZWB6 473 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 CYP2U1Q7Z449 544 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 EFHD1Q9BUP0 239 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 ADI1Q9BV57 179 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 GBA2Q9HCG7 927 aaPredicted RBP14.86□□□□□ -0.03
TOP3B-201ENST00000357179 VPS51Q9UID3 782 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 PCDHGA7Q9Y5G6 932 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 C19orf81C9J6K1 198 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 MLNP12872 115 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 GRIA3P42263 894 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 CXCL9Q07325 125 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 ORC1Q13415 861 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 PRKG1Q13976 671 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 SF3B4Q15427 424 aaKnown RBP eCLIP14.86□□□□□ -0.034e-30■■■■■ 52.9
TOP3B-201ENST00000357179 LCLAT1Q6UWP7 414 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 CATSPERGQ6ZRH7 1159 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 TNS4Q8IZW8 715 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 TTC39CQ8N584 583 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 MINDY2Q8NBR6 621 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 AFG1LQ8WV93 481 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 STON2Q8WXE9 905 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 SEPT1Q8WYJ6 367 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 ZNF347Q96SE7 839 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 ILKAPQ9H0C8 392 aaPredicted RBP14.86□□□□□ -0.03
TOP3B-201ENST00000357179 SIAEQ9HAT2 523 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 SPO11Q9Y5K1 396 aa14.86□□□□□ -0.03
TOP3B-201ENST00000357179 METTL18O95568 372 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 ALOX5P09917 674 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 PSME3P61289 254 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 RAB6CQ53S08 254 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 SEL1L3Q68CR1 1132 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 CHST13Q8NET6 341 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 CXorf38Q8TB03 319 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 LPGAT1Q92604 370 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 FEM1CQ96JP0 617 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 HEXIM2Q96MH2 286 aaKnown RBP14.85□□□□□ -0.03
TOP3B-201ENST00000357179 TCF12Q99081 682 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 KLHL25Q9H0H3 589 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 RAB6CQ9H0N0 254 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 MTMR10Q9NXD2 777 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 SCAF8Q9UPN6 1271 aaKnown RBP14.85□□□□□ -0.03
TOP3B-201ENST00000357179 TCAF1Q9Y4C2 921 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 G3V2L1 256 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 APBA3O96018 575 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 TCEA1P23193 301 aaKnown RBP14.85□□□□□ -0.03
TOP3B-201ENST00000357179 TYK2P29597 1187 aa14.85□□□□□ -0.03
TOP3B-201ENST00000357179 IDUAP35475 653 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms