RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 A0A087X1B8 175 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 CAPN8A6NHC0 703 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 LRG1P02750 347 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 S100A3P33764 101 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 ARL4DP49703 201 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 LLGL2Q6P1M3 1020 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 FAM183BPQ6ZVS7 135 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 EPHX4Q8IUS5 362 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 SPATA6LQ8N4H0 392 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 TMEM161BQ8NDZ6 487 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 PGLYRP2Q96PD5 576 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 WDR18Q9BV38 432 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 SLC4A5Q9BY07 1137 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 SERHL2Q9H4I8 314 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 MROH8Q9H579 483 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 SERHLQ9NQF3 203 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 GMEB1Q9Y692 573 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 FOXO6A8MYZ6 492 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 VPS4BO75351 444 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 NOMO3P69849 1222 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 NFE2Q16621 373 aaPredicted RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 APOBEC3HQ6NTF7 200 aaKnown RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 LZTR1Q8N653 840 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 KCTD4Q8WVF5 259 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 ACE2Q9BYF1 805 aaPredicted RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 RAB26Q9ULW5 256 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 PRELID1Q9Y255 219 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 ATP6AP2A0A1C7CYW4 349 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 SNPHO15079 494 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 HDAC3O15379 428 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 ATP6AP2O75787 350 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 ZNF7P17097 686 aaPredicted RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 GRIK5Q16478 980 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 TRIM71Q2Q1W2 868 aaKnown RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 ZC3H12AQ5D1E8 599 aaKnown RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 SATL1Q86VE3 508 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 MTFMTQ96DP5 389 aaKnown RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 FAXDC2Q96IV6 333 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 STN1Q9H668 368 aaKnown RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 TGFB1I1O43294 461 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 IDH2P48735 452 aaKnown RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 UTS2BQ765I0 119 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 ZNF605Q86T29 641 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 TMEM132CQ8N3T6 1108 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 EBNA1BP2Q99848 306 aaKnown RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 SPAG4Q9NPE6 437 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 C2orf71A6NGG8 1288 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 LTA4HP09960 611 aaKnown RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 ADSSP30520 456 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 DPP10Q8N608 796 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 PTGR2Q8N8N7 351 aaPredicted RBP16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 PSMA8Q8TAA3 256 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 SMARCD1Q96GM5 515 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 NUAK2Q9H093 628 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 PORCNQ9H237 461 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 ENTPD7Q9NQZ7 604 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 PNPOQ9NVS9 261 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 ADPRHL2Q9NX46 363 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 OR12D3Q9UGF7 316 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 ADAM30Q9UKF2 790 aa16.65■□□□□ 0.26
SH3RF1-201ENST00000284637 USP39Q53GS9 565 aaKnown RBP16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 GPSM1Q86YR5 675 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 C10orf107Q8IVU9 208 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 AMER2Q8N7J2 671 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 MRPS31Q92665 395 aaKnown RBP16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 ZFYVE28Q9HCC9 887 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 LRRC4CQ9HCJ2 640 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 ZNF112Q9UJU3 913 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 PRPF19Q9UMS4 504 aaKnown RBP16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 FRMPD1Q5SYB0 1578 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 TRIM38O00635 465 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 SNAP91O60641 907 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 ANXA6P08133 673 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 PCID2Q5JVF3 399 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 UXS1Q8NBZ7 420 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 DQX1Q8TE96 717 aaKnown RBP16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 ASB2Q96Q27 587 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 SNCAIPQ9Y6H5 919 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 PIK3C2BO00750 1634 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 ADGRB1O14514 1584 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 CLK2P49760 499 aaKnown RBP16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 EPS8Q12929 822 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 NETO2Q8NC67 525 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 OR5B17Q8NGF7 314 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 WNT8BQ93098 351 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 TEKT5Q96M29 485 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 PURBQ96QR8 312 aaKnown RBP16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 FGFBP2Q9BYJ0 223 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 PRRG3Q9BZD7 231 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 LNPEPQ9UIQ6 1025 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 SLC25A13Q9UJS0 675 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 NPM3O75607 178 aaKnown RBP16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 NFKB1P19838 968 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 ATP5F1P24539 256 aaPredicted RBP16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 TAB1Q15750 504 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 KLHL17Q6TDP4 642 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 TCAIMQ8N3R3 496 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 LGMNQ99538 433 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 PRDM12Q9H4Q4 367 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms