RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 TSPAN4O14817 238 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 CBX6O95503 412 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 CAPN3P20807 821 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 ARSFP54793 590 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 GEMIN4P57678 1058 aaKnown RBP4.74□□□□□ -1.65
CCDC54-201ENST00000261058 UFM1P61960 85 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 MTX3Q5HYI7 312 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 C6orf10Q5SRN2 563 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 TMEM81Q6P7N7 255 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 IL20RBQ6UXL0 311 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 RSRC2Q7L4I2 434 aaKnown RBP4.74□□□□□ -1.65
CCDC54-201ENST00000261058 GPSM1Q86YR5 675 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 FAM185AQ8N0U4 392 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 GHDCQ8N2G8 530 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 GPATCH11Q8N954 259 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 ADAMTS15Q8TE58 950 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 TMEM79Q9BSE2 394 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 TRMOQ9BU70 441 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 USP44Q9H0E7 712 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 MAP6D1Q9H9H5 199 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 TUBA8Q9NY65 449 aaPredicted RBP4.74□□□□□ -1.65
CCDC54-201ENST00000261058 KCND2Q9NZV8 630 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 MPP6Q9NZW5 540 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 SARDHQ9UL12 918 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 ITIH6Q6UXX5 1313 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 LDLRAD4O15165 306 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 BAIAP3O94812 1187 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 RTN3O95197 1032 aaPredicted RBP4.73□□□□□ -1.65
CCDC54-201ENST00000261058 FGBP02675 491 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 MYZAPP0CAP1 466 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 COX7A2P14406 83 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 YWHAQP27348 245 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 DPP6P42658 865 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 PAFAH1B1P43034 410 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 EFNA5P52803 228 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 CYP4A11Q02928 519 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 FAM69AQ5T7M9 428 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 FAAH2Q6GMR7 532 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 FAM180BQ6P0A1 224 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 R3HCC1LQ7Z5L2 792 aaKnown RBP4.73□□□□□ -1.65
CCDC54-201ENST00000261058 TBC1D1Q86TI0 1168 aaPredicted RBP4.73□□□□□ -1.65
CCDC54-201ENST00000261058 SERPINA11Q86U17 422 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 TMC8Q8IU68 726 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.73□□□□□ -1.65
CCDC54-201ENST00000261058 C11orf65Q8NCR3 313 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 CMASQ8NFW8 434 aaPredicted RBP4.73□□□□□ -1.65
CCDC54-201ENST00000261058 PRSS3P2Q8NHM4 247 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 HDAC2Q92769 488 aaKnown RBP4.73□□□□□ -1.65
CCDC54-201ENST00000261058 ZHX3Q9H4I2 956 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 SLC32A1Q9H598 525 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 AAMDCQ9H7C9 122 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 TAS2R10Q9NYW0 307 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 PEMTQ9UBM1 199 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 HEY2Q9UBP5 337 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 SEL1LQ9UBV2 794 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 PNMA2Q9UL42 364 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 SLC4A4Q9Y6R1 1079 aa4.73□□□□□ -1.65
CCDC54-201ENST00000261058 LY6G6EA0A0G2JKS1 128 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 A0A1W2PPC1 479 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 C17orf102A2RUQ5 167 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 GAGE12JA6NER3 117 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 EBAG9O00559 213 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 MDM4O15151 490 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 KIF1CO43896 1103 aaKnown RBP4.72□□□□□ -1.65
CCDC54-201ENST00000261058 EPN2O95208 641 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 DDX58O95786 925 aaKnown RBP4.72□□□□□ -1.65
CCDC54-201ENST00000261058 IFNA2P01563 188 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 TNFSF8P32971 234 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 MAN1A1P33908 653 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 TTKP33981 857 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 RYKP34925 604 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 CCR9P51686 369 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 INPP5JQ15735 1006 aaPredicted RBP4.72□□□□□ -1.65
CCDC54-201ENST00000261058 SRSF7Q16629 238 aaKnown RBP eCLIP4.72□□□□□ -1.65
CCDC54-201ENST00000261058 TSTQ16762 297 aaKnown RBP4.72□□□□□ -1.65
CCDC54-201ENST00000261058 CCDC142Q17RM4 750 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 DPY19L2P1Q6NXN4 242 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 FAM83HQ6ZRV2 1179 aaPredicted RBP4.72□□□□□ -1.65
CCDC54-201ENST00000261058 FAM160B2Q86V87 743 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 DNAAF1Q8NEP3 725 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 TDRD7Q8NHU6 1098 aaKnown RBP4.72□□□□□ -1.65
CCDC54-201ENST00000261058 BICD2Q8TD16 824 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 NOC3LQ8WTT2 800 aaKnown RBP4.72□□□□□ -1.65
CCDC54-201ENST00000261058 CENPIQ92674 756 aaPredicted RBP4.72□□□□□ -1.65
CCDC54-201ENST00000261058 B3GNT4Q9C0J1 378 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 SLC25A18Q9H1K4 315 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 KLHL31Q9H511 634 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 BRF2Q9HAW0 419 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 IL1RAPL1Q9NZN1 696 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 KIAA1456Q9P272 454 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 TBC1D14Q9P2M4 693 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 RAI2Q9Y5P3 530 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 TDRD9Q8NDG6 1382 aaKnown RBP4.72□□□□□ -1.65
CCDC54-201ENST00000261058 A0A1W2PPH5 198 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 ARHGAP10A1A4S6 786 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 DDTLA6NHG4 134 aaPredicted RBP4.72□□□□□ -1.65
CCDC54-201ENST00000261058 TGFB1I1O43294 461 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 IL1AP01583 271 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 KLKB1P03952 638 aa4.72□□□□□ -1.65
CCDC54-201ENST00000261058 HEXAP06865 529 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms