RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Q32P12 615 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Psapl1Q8C1C1 522 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Hdac7Q8C2B3 938 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Znf276Q8CE64 614 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Gbp5Q8CFB4 590 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Ppp4r1Q8K2V1 951 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Vmn1r213Q8R278 384 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Rpa1Q8VEE4 623 aaKnown RBP15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Q99KU6 348 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Oma1Q9D8H7 521 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Cab39lQ9DB16 337 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Cacng3Q9JJV5 315 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Cyp3a41aQ9JMA7 504 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Sept6Q9R1T4 434 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Tmem115Q9WUH1 350 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Itga9B8JK39 1036 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Ring1O35730 406 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Hcn2O88703 863 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Dnmt3cP0DOY1 709 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Adamts8P57110 905 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 AurkaP97477 395 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 IqcmQ149I8 489 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Slc22a16Q497L8 649 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Abl2Q4JIM5 1182 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Prss53Q571E5 552 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Tmem255bQ5FW56 369 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Pnma8aQ80VM8 430 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Slc41a2Q8BYR8 573 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Cwf19l1Q8CI33 537 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Acad9Q8JZN5 625 aaKnown RBP15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Ces2aQ8QZR3 558 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Lrrc42Q8R2U7 421 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Lrrc8cQ8R502 803 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Adamts5Q9R001 930 aa15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Nup205A0A0J9YUD5 2061 aaKnown RBP15.03■□□□□ -0
Nup88-202ENSMUST00000108530 Myo10F8VQB6 2062 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Nup62clA2AG10 272 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Vmn2r86G5E8Y4 848 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Vmn2r70K7N702 854 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Psma3O70435 255 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 AvilO88398 819 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Cd160O88875 185 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Tap1P21958 724 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 S100bP50114 92 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Ndst2P52850 883 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Hoxd13P70217 339 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Mif4gdQ3UBZ5 222 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Fstl1Q62356 306 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Npdc1Q64322 332 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Fstl5Q8BFR2 847 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Znf365Q8BG89 408 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Ccdc40Q8BI79 1192 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Adam33Q923W9 797 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Tcf7l2Q924A0 459 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Mat2bQ99LB6 334 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 LiasQ99M04 373 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 RpainQ9CWY9 219 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Ssu72Q9CY97 194 aaKnown RBP15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Tmem135Q9CYV5 458 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Mxra7Q9CZH7 178 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 1700109H08RikQ9D9C0 210 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 GghQ9Z0L8 317 aa15.02■□□□□ -0
Nup88-202ENSMUST00000108530 Rp1P56716 2095 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Zfp626A0A0U1RQ84 676 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Zfp612A0A1D5RMC2 672 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Smok3aC0HKC8 504 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Smok3bC0HKC9 504 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Eftud2O08810 971 aaKnown RBP15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Crabp2P22935 138 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Tlx1P43345 332 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Neurog1P70660 244 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 StacP97306 403 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Cdh6P97326 790 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Lmf1Q3U3R4 574 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Kpna1Q60960 538 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Sh3rf1Q69ZI1 892 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Xlr3bQ6P205 226 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Maml1Q6T264 1020 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Zfp719Q8BIV1 735 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Mterf2Q8BKY8 385 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Cgrrf1Q8BMJ7 332 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Klhl38Q8BSF5 581 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Tusc3Q8BTV1 347 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Aldh4a1Q8CHT0 562 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Abcf3Q8K268 709 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Pramel1Q99MW3 458 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Agpat3Q9D517 376 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 TsaccQ9DA44 124 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Stk11Q9WTK7 436 aa15.02□□□□□ -0.01
Nup88-202ENSMUST00000108530 Malrd1A2AJX4 2123 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Vwa8Q8CC88 1905 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Nhsl2B1AXH1 854 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Dthd1E9PZX1 795 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Vmn2r111K7N674 857 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Limk2O54785 638 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Fgf18O89101 207 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 PenkP22005 268 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 DesP31001 469 aaKnown RBP15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Gpr3P35413 330 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Vps4bP46467 444 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 68.7 ms