RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 DNAJC21Q5F1R6 531 aaKnown RBP17.6■□□□□ 0.41
PHGDH-234ENST00000642041 FAM78AQ5JUQ0 283 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 CEP85LQ5SZL2 805 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 OTUD1Q5VV17 481 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-234ENST00000642041 ITPRIPL1Q6GPH6 555 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 TAOK1Q7L7X3 1001 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 KBTBD6Q86V97 674 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 ZC3H18Q86VM9 953 aaKnown RBP17.6■□□□□ 0.41
PHGDH-234ENST00000642041 FAM71DQ8N9W8 422 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 ATAD1Q8NBU5 361 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 TSEN2Q8NCE0 465 aaKnown RBP17.6■□□□□ 0.41
PHGDH-234ENST00000642041 SCAMP5Q8TAC9 235 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 EDEM1Q92611 657 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 FATE1Q969F0 183 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 HDAC11Q96DB2 347 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 TBC1D31Q96DN5 1066 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 ATP6V1G3Q96LB4 118 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 GDAP1L1Q96MZ0 367 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 RBM15Q96T37 977 aaKnown RBP eCLIP17.6■□□□□ 0.414e-7■■■□□ 17.3
PHGDH-234ENST00000642041 NAT9Q9BTE0 207 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 XAB2Q9HCS7 855 aaKnown RBP17.6■□□□□ 0.41
PHGDH-234ENST00000642041 EIF2B3Q9NR50 452 aaKnown RBP17.6■□□□□ 0.41
PHGDH-234ENST00000642041 TMEM30AQ9NV96 361 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 C2orf42Q9NWW7 574 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 DTLQ9NZJ0 730 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 ADAMTS20P59510 1910 aa17.6■□□□□ 0.41
PHGDH-234ENST00000642041 C4orf47A7E2U8 309 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 KCNU1A8MYU2 1149 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 AGPSO00116 658 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 RPP40O75818 363 aaKnown RBP17.59■□□□□ 0.41
PHGDH-234ENST00000642041 CEACAM1P13688 526 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 PECAM1P16284 738 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-234ENST00000642041 ERCC2P18074 760 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 TFE3P19532 575 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-234ENST00000642041 AMPD1P23109 780 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 EPHB2P29323 1055 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 MAGEA4P43358 317 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 TBX4P57082 545 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 PARP6Q2NL67 630 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 DGKKQ5KSL6 1271 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 TMCO4Q5TGY1 634 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 Q6ZS52 159 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 ARHGEF18Q6ZSZ5 1173 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 SCD5Q86SK9 330 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 TCEAL8Q8IYN2 117 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 NAT8LQ8N9F0 302 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 DEPDC1BQ8WUY9 529 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 SLC39A13Q96H72 371 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 ASB16Q96NS5 453 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 TSGA13Q96PP4 275 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 EDEM2Q9BV94 578 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 CNOT10Q9H9A5 744 aaKnown RBP17.59■□□□□ 0.41
PHGDH-234ENST00000642041 TMBIM4Q9HC24 238 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.59■□□□□ 0.41
PHGDH-234ENST00000642041 GPATCH2LQ9NWQ4 482 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 TRPM5Q9NZQ8 1165 aa17.59■□□□□ 0.41
PHGDH-234ENST00000642041 BPTFQ12830 3046 aa17.58■□□□□ 0.41
PHGDH-234ENST00000642041 A0A0A0MRY4 1105 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 CCDC163A0A0D9SF12 145 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 A0A1W2PQH9 124 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 SLC38A8A6NNN8 435 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 E7ESA3 106 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 E7EVH7 732 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 PRRG1O14668 218 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 AGTP01019 485 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 PTPN2P17706 415 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 CCNCP24863 283 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 ATP5C1P36542 298 aaKnown RBP17.58■□□□□ 0.4
PHGDH-234ENST00000642041 EPHB3P54753 998 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 DUSP4Q13115 394 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 TRIP13Q15645 432 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-234ENST00000642041 DDR2Q16832 855 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 ANO4Q32M45 955 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 VITQ6UXI7 678 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 CCDC25Q86WR0 208 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 ATP11CQ8NB49 1132 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 NDRG1Q92597 394 aaKnown RBP17.58■□□□□ 0.4
PHGDH-234ENST00000642041 PRCCQ92733 491 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-234ENST00000642041 ZC3H10Q96K80 434 aaKnown RBP17.58■□□□□ 0.4
PHGDH-234ENST00000642041 SPATA13Q96N96 652 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 CYP4F11Q9HBI6 524 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 DNMT3LQ9UJW3 386 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 NEUROG3Q9Y4Z2 214 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 YIPF1Q9Y548 306 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 NFS1Q9Y697 457 aa17.58■□□□□ 0.4
PHGDH-234ENST00000642041 SYNJ2BP-COX16A0A087WUM0 186 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 NRG2O14511 850 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-234ENST00000642041 RASGRF2O14827 1237 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 VNN2O95498 520 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 FGF19O95750 216 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 LATS1O95835 1130 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 CSRP1P21291 193 aaKnown RBP17.57■□□□□ 0.4
PHGDH-234ENST00000642041 RBL1P28749 1068 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 VPS41P49754 854 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 NDST2P52849 883 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 BASP1P80723 227 aaKnown RBP17.57■□□□□ 0.4
PHGDH-234ENST00000642041 PPIDQ08752 370 aaKnown RBP17.57■□□□□ 0.4
PHGDH-234ENST00000642041 TAF10Q12962 218 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 SLC29A2Q14542 456 aa17.57■□□□□ 0.4
PHGDH-234ENST00000642041 PRPSAP1Q14558 356 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms