RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 A0A1B0GTL3 188 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 LRRIQ3A6PVS8 624 aaPredicted RBP7.04□□□□□ -1.28
MUC1-221ENST00000610359 YJEFN3A6XGL0 299 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 E7ENQ6 273 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 C1QTNF3-AMACRE9PGA6 284 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 CNTN5O94779 1100 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 CLSTN1O94985 981 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 LUC7L3O95232 432 aaKnown RBP7.04□□□□□ -1.28
MUC1-221ENST00000610359 MOCS3O95396 460 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 ZBED1O96006 694 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 PAK4O96013 591 aaPredicted RBP7.04□□□□□ -1.28
MUC1-221ENST00000610359 PDGFAP04085 211 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 ANXA6P08133 673 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 TSHRP16473 764 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 GJB2P29033 226 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 UGT1A3P35503 534 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 RABIFP47224 123 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 TKTL1P51854 596 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 NEK4P51957 841 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 ANAPC15P60006 121 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 CLDN10P78369 228 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 CDC20Q12834 499 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 MRPL49Q13405 166 aaKnown RBP7.04□□□□□ -1.28
MUC1-221ENST00000610359 CDH18Q13634 790 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 DEFB109BQ30KR1 87 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 DCAF6Q58WW2 860 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 MS4A13Q5J8X5 152 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 ATP1A1-AS1Q5TC04 95 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 RNF219Q5W0B1 726 aaPredicted RBP7.04□□□□□ -1.28
MUC1-221ENST00000610359 BSPRYQ5W0U4 402 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 ESRP1Q6NXG1 681 aaKnown RBP7.04□□□□□ -1.28
MUC1-221ENST00000610359 Q6ZVU0 165 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 PHACTR4Q8IZ21 702 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 IL22RA1Q8N6P7 574 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 ARL10Q8N8L6 244 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 FAM184AQ8NB25 1140 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 XXYLT1Q8NBI6 393 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 GPBAR1Q8TDU6 330 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 PARD3BQ8TEW8 1205 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 APOBEC4Q8WW27 367 aaKnown RBP7.04□□□□□ -1.28
MUC1-221ENST00000610359 TMEM159Q96B96 161 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 MOCOSQ96EN8 888 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 SLC45A3Q96JT2 553 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 NT5C1AQ9BXI3 368 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 SLC17A9Q9BYT1 436 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 SEMA6CQ9H3T2 930 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 DKK3Q9UBP4 350 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 APOBEC3BQ9UH17 382 aaKnown RBP7.04□□□□□ -1.28
MUC1-221ENST00000610359 IPO11Q9UI26 975 aaKnown RBP7.04□□□□□ -1.28
MUC1-221ENST00000610359 NAALADL1Q9UQQ1 740 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 RNF215Q9Y6U7 377 aa7.04□□□□□ -1.28
MUC1-221ENST00000610359 DOCK4Q8N1I0 1966 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 TTLL8A6PVC2 850 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 EFCAB7A8K855 629 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 ALOX15BO15296 676 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 ATP9BO43861 1147 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 PCDH8O95206 1070 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 CD2BP2O95400 341 aaKnown RBP7.03□□□□□ -1.28
MUC1-221ENST00000610359 ASS1P00966 412 aaKnown RBP7.03□□□□□ -1.28
MUC1-221ENST00000610359 FGF3P11487 239 aaPredicted RBP7.03□□□□□ -1.28
MUC1-221ENST00000610359 PDGFRAP16234 1089 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 NNMTP40261 264 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 SLC11A2P49281 568 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 PFN3P60673 137 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 DLG4P78352 724 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 HMGN5P82970 282 aaKnown RBP7.03□□□□□ -1.28
MUC1-221ENST00000610359 DLG2Q15700 870 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 ARHGAP44Q17R89 818 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 SGSM1Q2NKQ1 1148 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 EFHC2Q5JST6 749 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 MCTP1Q6DN14 999 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 TCTN3Q6NUS6 607 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 MSANTD2Q6P1R3 559 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 NYAP1Q6ZVC0 841 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 SV2BQ7L1I2 683 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 CENPQQ7L2Z9 268 aaPredicted RBP7.03□□□□□ -1.28
MUC1-221ENST00000610359 EPM2AIP1Q7L775 607 aaPredicted RBP7.03□□□□□ -1.28
MUC1-221ENST00000610359 CCNJLQ8IV13 435 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 SFTPA2Q8IWL1 248 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 CACNA2D3Q8IZS8 1091 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 EFCAB3Q8N7B9 438 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 Q8N9G6 341 aaPredicted RBP7.03□□□□□ -1.28
MUC1-221ENST00000610359 PCDH19Q8TAB3 1148 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 ZNF507Q8TCN5 953 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 RNF139Q8WU17 664 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 BTN2A2Q8WVV5 523 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 AZIN2Q96A70 460 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 FCRL2Q96LA5 508 aaPredicted RBP7.03□□□□□ -1.28
MUC1-221ENST00000610359 TBATAQ96M53 351 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 HEXIM2Q96MH2 286 aaKnown RBP7.03□□□□□ -1.28
MUC1-221ENST00000610359 CMKLR1Q99788 373 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 SLC4A5Q9BY07 1137 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 UNKQ9C0B0 810 aaKnown RBP7.03□□□□□ -1.28
MUC1-221ENST00000610359 APOBEC3GQ9HC16 384 aaKnown RBP7.03□□□□□ -1.28
MUC1-221ENST00000610359 STK17AQ9UEE5 414 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 XPO7Q9UIA9 1087 aaKnown RBP7.03□□□□□ -1.28
MUC1-221ENST00000610359 MAP4K5Q9Y4K4 846 aa7.03□□□□□ -1.28
MUC1-221ENST00000610359 LOC101059948A0A1B0GTJ6 334 aa7.02□□□□□ -1.29
MUC1-221ENST00000610359 TCP11X1B4DZS4 312 aa7.02□□□□□ -1.29
MUC1-221ENST00000610359 KPNA3O00505 521 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms