RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TMEM110Q86TL2 294 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 PIGZQ86VD9 579 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 CHSY1Q86X52 802 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 HIPK4Q8NE63 616 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 TEKT4Q8WW24 435 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 DNAJB3Q8WWF6 145 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 DNAJC9Q8WXX5 260 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 USP6NLQ92738 828 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 MIEF2Q96C03 454 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 TRMT2BQ96GJ1 504 aaKnown RBP5.48□□□□□ -1.53
VAPA-203ENST00000577539 SIGLEC10Q96LC7 697 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 PGLYRP2Q96PD5 576 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 TTC1Q99614 292 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 OSBPL1AQ9BXW6 950 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 DNAI2Q9GZS0 605 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 DCLRE1BQ9H816 532 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 CLIC5Q9NZA1 410 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 DTLQ9NZJ0 730 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 DNAJC16Q9Y2G8 782 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.48□□□□□ -1.53
VAPA-203ENST00000577539 MCM3APO60318 1980 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 WDR81Q562E7 1941 aa5.48□□□□□ -1.53
VAPA-203ENST00000577539 POLR2AP24928 1970 aaKnown RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 SDR42E2A6NKP2 422 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 KPNA7A9QM74 516 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 MDM4O15151 490 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 SIN3BO75182 1162 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 RFPL1O75677 317 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 RNASEH2AO75792 299 aaKnown RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 GSTP1P09211 210 aaKnown RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 NCF2P19878 526 aaPredicted RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 PSMB4P28070 264 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 SERPINB9P50453 376 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 CRYMQ14894 314 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 TRIM61Q5EBN2 209 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 CFAP157Q5JU67 520 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 C9orf57Q5W0N0 161 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 TWF2Q6IBS0 349 aaKnown RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 TAPT1Q6NXT6 567 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 RASSF3Q86WH2 238 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 ZNF276Q8N554 614 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 SLC25A41Q8N5S1 370 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 ANKRD52Q8NB46 1076 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 PPTC7Q8NI37 304 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 PPP4R1Q8TF05 950 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 CLPTM1LQ96KA5 538 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 C16orf70Q9BSU1 422 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 NFKBIZQ9BYH8 718 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 PRDM12Q9H4Q4 367 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 ATP13A2Q9NQ11 1180 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 SLC5A4Q9NY91 659 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 CACNG4Q9UBN1 327 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 UBQLN1Q9UMX0 589 aaKnown RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 A0A0A0MRY4 1105 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 MEI4A8MW99 385 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 TPP1O14773 563 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 NVLO15381 856 aaKnown RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 MFSD11O43934 449 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 ADAM11O75078 769 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 WFS1O76024 890 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 LUC7L3O95232 432 aaKnown RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 DHRS4L1P0CG22 281 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 ERVK-10P10266 1014 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 GCKP35557 465 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 NDUFV1P49821 464 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 TAF6P49848 677 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 DEUP1Q05D60 604 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 OLIG2Q13516 323 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 DGKDQ16760 1214 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 ACSBG2Q5FVE4 666 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 PPM1JQ5JR12 505 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 EFHC1Q5JVL4 640 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 SNX30Q5VWJ9 437 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 CAPRIN2Q6IMN6 1127 aaKnown RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 ADGRF2Q8IZF7 708 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 POU5F2Q8N7G0 328 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 RNF169Q8NCN4 708 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 SLC7A14Q8TBB6 771 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 LRRC39Q96DD0 335 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 SPATA13Q96N96 652 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 EBF4Q9BQW3 602 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 SPATA9Q9BWV2 254 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 KCNK13Q9HB14 408 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 CYP4F11Q9HBI6 524 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 VTA1Q9NP79 307 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 PLA2G2EQ9NZK7 142 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 LUZP4Q9P127 313 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 NME7Q9Y5B8 376 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 TIMM13Q9Y5L4 95 aaPredicted RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 CCL15-CCL14A0A0B4J2E2 113 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 LOC100653049A0A140TA62 436 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 PRR5-ARHGAP8B1AHC4 643 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 PDHXO00330 501 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 EEF2KO00418 725 aaKnown RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 ST8SIA5O15466 376 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 AKAP10O43572 662 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 XPOTO43592 962 aaKnown RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 KRT34O76011 436 aa5.47□□□□□ -1.53
VAPA-203ENST00000577539 LMNAP02545 664 aaKnown RBP5.47□□□□□ -1.53
VAPA-203ENST00000577539 BPGMP07738 259 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms