RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CHRM3P20309 590 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 UBA1P22314 1058 aaKnown RBP5.91□□□□□ -1.46
SF3B3-214ENST00000572365 GABRB3P28472 473 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 LRPAP1P30533 357 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 HALP42357 657 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 ALDH9A1P49189 494 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 METAP2P50579 478 aaKnown RBP eCLIP5.91□□□□□ -1.46
SF3B3-214ENST00000572365 MRPL12P52815 198 aaKnown RBP5.91□□□□□ -1.46
SF3B3-214ENST00000572365 COPAP53621 1224 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 MC2RQ01718 297 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 ITIH3Q06033 890 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 ARHGEF7Q14155 803 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 SF3A2Q15428 464 aaKnown RBP5.91□□□□□ -1.46
SF3B3-214ENST00000572365 PDCD2Q16342 344 aaPredicted RBP5.91□□□□□ -1.46
SF3B3-214ENST00000572365 MGAT5BQ3V5L5 792 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 SOWAHCQ53LP3 525 aaPredicted RBP5.91□□□□□ -1.46
SF3B3-214ENST00000572365 PRR16Q569H4 304 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 RABL3Q5HYI8 236 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 RRAGBQ5VZM2 374 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 B3GNTL1Q67FW5 361 aaPredicted RBP5.91□□□□□ -1.46
SF3B3-214ENST00000572365 DCLRE1AQ6PJP8 1040 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 CLNKQ7Z7G1 428 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 TMPRSS6Q8IU80 811 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 TMEM132CQ8N3T6 1108 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 MRPL43Q8N983 215 aaKnown RBP5.91□□□□□ -1.46
SF3B3-214ENST00000572365 CPT1CQ8TCG5 803 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 SECISBP2LQ93073 1101 aaKnown RBP5.91□□□□□ -1.46
SF3B3-214ENST00000572365 C18orf8Q96DM3 657 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 LRRC46Q96FV0 321 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 NECTIN4Q96NY8 510 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 MYADMQ96S97 322 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 ADAM2Q99965 735 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 BDH2Q9BUT1 245 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 DEF6Q9H4E7 631 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 NECTIN3Q9NQS3 549 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 PXMP2Q9NR77 195 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 DKK4Q9UBT3 224 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 WNT16Q9UBV4 365 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 SLC39A10Q9ULF5 831 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 MAGED2Q9UNF1 606 aaPredicted RBP5.91□□□□□ -1.46
SF3B3-214ENST00000572365 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.91□□□□□ -1.46
SF3B3-214ENST00000572365 TENM4Q6N022 2769 aa5.91□□□□□ -1.46
SF3B3-214ENST00000572365 LAMA4Q16363 1823 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 GON4LQ3T8J9 2241 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 MYO18BQ8IUG5 2567 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 hCG_1642624A0A1W2PR95 340 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 H7C4K7 107 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 RAB27BO00194 218 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 ZFPL1O95159 310 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 STAG3L1P0CL83 205 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 PDIA3P30101 505 aaKnown RBP5.9□□□□□ -1.46
SF3B3-214ENST00000572365 HOXC8P31273 242 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 PXNP49023 591 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-214ENST00000572365 LILRA4P59901 499 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 CXADRP78310 365 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 GPC5P78333 572 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 ADAM17P78536 824 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 SATB1Q01826 763 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 DYRK1AQ13627 763 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 HLXQ14774 488 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-214ENST00000572365 PRKD1Q15139 912 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-214ENST00000572365 TMEM95Q3KNT9 176 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 ZIK1Q3SY52 487 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-214ENST00000572365 PLAG1Q6DJT9 500 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 TLDC1Q6P9B6 456 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 USP17L6PQ6QN14 398 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 LAYNQ6UX15 382 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 TTLL10Q6ZVT0 673 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 MTERF4Q7Z6M4 381 aaKnown RBP5.9□□□□□ -1.46
SF3B3-214ENST00000572365 ZNF280BQ86YH2 543 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 ANKRD42Q8N9B4 389 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 BOD1Q96IK1 185 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 LOXL4Q96JB6 756 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 ZNF668Q96K58 619 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-214ENST00000572365 TMEM47Q9BQJ4 181 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.9□□□□□ -1.461e-8■□□□□ 10.6
SF3B3-214ENST00000572365 FAM83DQ9H4H8 585 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 AGO4Q9HCK5 861 aaKnown RBP5.9□□□□□ -1.46
SF3B3-214ENST00000572365 HEYLQ9NQ87 328 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-214ENST00000572365 ARHGEF3Q9NR81 526 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 SEMA4GQ9NTN9 838 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 DNMT3BQ9UBC3 853 aaKnown RBP5.9□□□□□ -1.46
SF3B3-214ENST00000572365 ST6GALNAC2Q9UJ37 374 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 GMEB2Q9UKD1 530 aa5.9□□□□□ -1.46
SF3B3-214ENST00000572365 MTO1Q9Y2Z2 717 aaKnown RBP5.9□□□□□ -1.46
SF3B3-214ENST00000572365 MORC2Q9Y6X9 1032 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-214ENST00000572365 PCNX2A6NKB5 2137 aa5.9□□□□□ -1.47
SF3B3-214ENST00000572365 F5P12259 2224 aa5.9□□□□□ -1.47
SF3B3-214ENST00000572365 PIEZO2Q9H5I5 2752 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 FAM234BA2RU67 622 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 RNASET2O00584 256 aaKnown RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 TOR1BO14657 336 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 GPAA1O43292 621 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 ERN1O75460 977 aaKnown RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 SKAP2O75563 359 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 NDST3O95803 873 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 CSTBP04080 98 aaKnown RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 PRB1P04280 392 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 ITGALP20701 1170 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 PPIFP30405 207 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms