RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 EPHB6O15197 1021 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 LATO43561 262 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 SNAP91O60641 907 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 SDC3O75056 442 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 RTN2O75298 545 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 MT-CO1P00395 513 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 TBC1D3HP0C7X1 549 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 EEF1GP26641 437 aaKnown RBP12.15□□□□□ -0.46
GABPB1-206ENST00000543881 UCNP55089 124 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 CDH4P55283 916 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 NOMO3P69849 1222 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 DEUP1Q05D60 604 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 MTA1Q13330 715 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 DLG2Q15700 870 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 SLC25A52Q3SY17 297 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 POM121L1PQ3SYA9 428 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 ACCSLQ4AC99 568 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 RAB6CQ53S08 254 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 CT47A1Q5JQC4 288 aaPredicted RBP12.15□□□□□ -0.46
GABPB1-206ENST00000543881 CDKAL1Q5VV42 579 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 TBC1D3GQ6DHY5 549 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 TBC1D3CQ6IPX1 549 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 NAPEPLDQ6IQ20 393 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 Q6ZVU0 165 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 TBC1D3Q8IZP1 549 aaPredicted RBP12.15□□□□□ -0.46
GABPB1-206ENST00000543881 SH2D3CQ8N5H7 860 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 ENOX1Q8TC92 643 aaKnown RBP12.15□□□□□ -0.46
GABPB1-206ENST00000543881 GPT2Q8TD30 523 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 SLC20A1Q8WUM9 679 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 CPA5Q8WXQ8 436 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 HIC2Q96JB3 615 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 ZNF578Q96N58 590 aaPredicted RBP12.15□□□□□ -0.46
GABPB1-206ENST00000543881 SEMA4CQ9C0C4 833 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 RAB6CQ9H0N0 254 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 VPS16Q9H269 839 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 CLMPQ9H6B4 373 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 SLC25A13Q9UJS0 675 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 NOCTQ9UK39 431 aaKnown RBP12.15□□□□□ -0.46
GABPB1-206ENST00000543881 VPS28Q9UK41 221 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 PPM1HQ9ULR3 514 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 STAP1Q9ULZ2 295 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 PCDHB1Q9Y5F3 818 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 IGLV3-10A0A075B6K4 115 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 A0A0D9SEW6 157 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 B8ZZF3 427 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 GOLGA8SH3BPF8 625 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 PYCARD-AS1I3L0S3 204 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 K7ERQ8 282 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 RNF103O00237 685 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 TRIM38O00635 465 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 MCF2LO15068 1137 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 SIGLEC6O43699 453 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 GFPT2O94808 682 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 LSM8O95777 96 aaKnown RBP12.14□□□□□ -0.47
GABPB1-206ENST00000543881 MPOP05164 745 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 SRCP12931 536 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 CHRNB2P17787 502 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 LY6DQ14210 128 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 KRT31Q15323 416 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 NAA35Q5VZE5 725 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 FAM181AQ8N9Y4 354 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 OR8D1Q8WZ84 308 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 CFAP57Q96MR6 1250 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 MUC3BQ9H195 1237 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 MPP6Q9NZW5 540 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 ARHGAP20Q9P2F6 1191 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 ZNF212Q9UDV6 495 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 NAV2Q8IVL1 2488 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 DOCK9Q9BZ29 2069 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 MAGEC1O60732 1142 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 F9P00740 461 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 CTSLP07711 333 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 RHOCP08134 193 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 C6P13671 934 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 ZNF18P17022 549 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 DAB2P98082 770 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 CNTN1Q12860 1018 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 ZNF211Q13398 564 aaPredicted RBP12.14□□□□□ -0.47
GABPB1-206ENST00000543881 AGBL4Q5VU57 503 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 RBM43Q6ZSC3 357 aaKnown RBP12.14□□□□□ -0.47
GABPB1-206ENST00000543881 TFAP2DQ7Z6R9 452 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 PRPF39Q86UA1 669 aaKnown RBP12.14□□□□□ -0.47
GABPB1-206ENST00000543881 IQCHQ86VS3 1027 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 EMC1Q8N766 993 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 C1orf74Q96LT6 269 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 PPP1R9BQ96SB3 815 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 FANCLQ9NW38 375 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 VPS51Q9UID3 782 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 HS3ST2Q9Y278 367 aa12.14□□□□□ -0.47
GABPB1-206ENST00000543881 KLK10O43240 276 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 SMAD6O43541 496 aaKnown RBP12.13□□□□□ -0.47
GABPB1-206ENST00000543881 PLRG1O43660 514 aaKnown RBP12.13□□□□□ -0.47
GABPB1-206ENST00000543881 BNIP3LO60238 219 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 CYP1A1P04798 512 aaPredicted RBP12.13□□□□□ -0.47
GABPB1-206ENST00000543881 RRM1P23921 792 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 MAT2AP31153 395 aaKnown RBP12.13□□□□□ -0.47
GABPB1-206ENST00000543881 JAM2P57087 298 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 TAS2R38P59533 333 aa12.13□□□□□ -0.47
GABPB1-206ENST00000543881 POLR2FP61218 127 aaKnown RBP12.13□□□□□ -0.47
GABPB1-206ENST00000543881 GABREP78334 506 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms