RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TMIEQ8NEW7 156 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 OR2T34Q8NGX1 318 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 OR14C36Q8NHC7 312 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PIP4K2CQ8TBX8 421 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SNX19Q92543 992 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 BIRC7Q96CA5 298 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TRIM11Q96F44 468 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CCDC114Q96M63 670 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.95□□□□□ -0.826e-7■□□□□ 9.6
TNFRSF1A-214ENST00000543048 ACE2Q9BYF1 805 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ISCUQ9H1K1 167 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MAGEH1Q9H213 219 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ATP13A1Q9HD20 1204 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 OSGEPQ9NPF4 335 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FSCN3Q9NQT6 498 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TMEM248Q9NWD8 314 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CNOT8Q9UFF9 292 aaKnown RBP9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SERGEFQ9UGK8 458 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DNAI1Q9UI46 699 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SARDHQ9UL12 918 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FZD10Q9ULW2 581 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HPCAL4Q9UM19 191 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 LUC7L2Q9Y383 392 aaKnown RBP9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ANKRD36A6QL64 1941 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 NCOR2Q9Y618 2525 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SHROOM3Q8TF72 1996 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TBC1D3DA0A087WVF3 549 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TBC1D3IA0A087WXS9 549 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TBC1D3EA0A087X179 549 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TBC1D3KA0A087X1G2 549 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CXorf51AA0A1B0GTR3 108 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TBC1D3FA6NER0 549 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 UPK3BL1B0FP48 263 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TBC1D3LB9A6J9 549 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 UPK3BL2E5RIL1 263 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 C1QTNF3-AMACRE9PGA6 284 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SLC7A4O43246 635 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 BNIP3LO60238 219 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RNF8O76064 485 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SERPING1P05155 500 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TBC1D3HP0C7X1 549 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MYBL1P10243 752 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CSRP1P21291 193 aaKnown RBP9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PSMA2P25787 234 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CHRNA3P32297 505 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RECQLP46063 649 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CCR5P51681 352 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 AFF3P51826 1226 aaKnown RBP9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CCDC15Q0P6D6 951 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SLC14A1Q13336 389 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 POLD3Q15054 466 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TEAD4Q15561 434 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HGSNATQ68CP4 663 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TBC1D3GQ6DHY5 549 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TBC1D3CQ6IPX1 549 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 NCEH1Q6PIU2 408 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 LINGO4Q6UY18 593 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 Q6ZVU0 165 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DNAAF5Q86Y56 855 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TBC1D3Q8IZP1 549 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PYROXD2Q8N2H3 581 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MINDY1Q8N5J2 469 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RNF214Q8ND24 703 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 OR2A12Q8NGT7 310 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ARHGEF2Q92974 986 aaKnown RBP9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 NCAPGQ9BPX3 1015 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CEP44Q9C0F1 390 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RBSNQ9H1K0 784 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 KDM4CQ9H3R0 1056 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CATSPERBQ9H7T0 1116 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GRPEL1Q9HAV7 217 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MRPL47Q9HD33 250 aaKnown RBP9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 NDFIP2Q9NV92 336 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DNAAF2Q9NVR5 837 aaKnown RBP9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TPX2Q9ULW0 747 aaKnown RBP9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SCINQ9Y6U3 715 aa9.94□□□□□ -0.82
TNFRSF1A-214ENST00000543048 A0A1W2PPC4 97 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 WASH4PA8MWX3 477 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PLK4O00444 970 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CBFA2T2O43439 604 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 KDELR3O43731 214 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CREB3O43889 395 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RAMP2O60895 175 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ZNF821O75541 412 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PRNPP04156 253 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 IGHV4-34P06331 123 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CEACAM1P13688 526 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 EPHB2P29323 1055 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HTR7P34969 479 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DRD3P35462 400 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ACVRL1P37023 503 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CSNK1EP49674 416 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SERPINH1P50454 418 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 NOVA1P51513 510 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DNA2P51530 1060 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GEMIN4P57678 1058 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ARF5P84085 180 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CNTN1Q12860 1018 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms