RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SUCLA2Q9P2R7 463 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P13-201ENST00000511263 NKX1-2Q9UD57 310 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P13-201ENST00000511263 ATPIF1Q9UII2 106 aa4.89□□□□□ -1.63
HMGB3P13-201ENST00000511263 ADAMTS5Q9UNA0 930 aa4.89□□□□□ -1.63
HMGB3P13-201ENST00000511263 EXOC6BQ9Y2D4 811 aa4.89□□□□□ -1.63
HMGB3P13-201ENST00000511263 R3HDM2Q9Y2K5 976 aaKnown RBP4.89□□□□□ -1.63
HMGB3P13-201ENST00000511263 GAKO14976 1311 aa4.89□□□□□ -1.63
HMGB3P13-201ENST00000511263 COL11A2P13942 1736 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P13-201ENST00000511263 NSD3Q9BZ95 1437 aa4.89□□□□□ -1.63
HMGB3P13-201ENST00000511263 CDC42BPGQ6DT37 1551 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 NRXN3Q9Y4C0 1643 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 C2orf81A6NN90 581 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 SRRM3A6NNA2 597 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 TMEM233B4DJY2 109 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 SPECC1L-ADORA2AF8WAN1 911 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 H0Y3Z8 333 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 UBE2Q2LH0YL09 131 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 M0QX08 132 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 RAB27BO00194 218 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 MAP2K7O14733 419 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 CD3EAPO15446 510 aaKnown RBP4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 MGRN1O60291 552 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 SHOX2O60902 331 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 MT-ND5P03915 603 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 S100A6P06703 90 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 CSF1RP07333 972 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 PDHA1P08559 390 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 MYL3P08590 195 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 GSTA2P09210 222 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 ENGP17813 658 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 FBLP22087 321 aaKnown RBP4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 MCM2P49736 904 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 SERPINB8P50452 374 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 GSDMDP57764 484 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 SLC10A2Q12908 348 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 PPP2R5BQ15173 497 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 ST3GAL2Q16842 350 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 SGSM1Q2NKQ1 1148 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZNF750Q32MQ0 723 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 SMUG1Q53HV7 270 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 GKAP1Q5VSY0 366 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 NCAPH2Q6IBW4 605 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 GALNT17Q6IS24 598 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 IRGCQ6NXR0 463 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 Q6ZWC4 215 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 UNC13DQ70J99 1090 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 DPP9Q86TI2 863 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZNF554Q86TJ5 538 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 KRT73Q86Y46 540 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 CARNMT1Q8N4J0 409 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 PJA1Q8NG27 643 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 DEPTORQ8TB45 409 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 DNAJB14Q8TBM8 379 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZNF764Q96H86 408 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 C17orf80Q9BSJ5 609 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 CCDC28BQ9BUN5 200 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 COLEC11Q9BWP8 271 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 VN1R3Q9BXE9 311 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 NAA15Q9BXJ9 866 aaKnown RBP4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 FSD1LQ9BXM9 530 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 FUT8Q9BYC5 575 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 MIS12Q9H081 205 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 VIPAS39Q9H9C1 493 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 EBF2Q9HAK2 575 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 GBA2Q9HCG7 927 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 HEYLQ9NQ87 328 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 STARD7Q9NQZ5 370 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 DLL3Q9NYJ7 618 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 NDUFA13Q9P0J0 144 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 DNMT3BQ9UBC3 853 aaKnown RBP4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 MYO1AQ9UBC5 1043 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 MID2Q9UJV3 735 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 AMFRQ9UKV5 643 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 GABRQQ9UN88 632 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZNF711Q9Y462 761 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 PCDHB2Q9Y5E7 798 aa4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 CHD2O14647 1828 aaKnown RBP4.88□□□□□ -1.63
HMGB3P13-201ENST00000511263 IQGAP1P46940 1657 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 ARPC4-TTLL3A0A0A6YYG9 625 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 HTR3EA5X5Y0 456 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 TARM1B6A8C7 271 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 H0YIZ8 118 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 H7C4K7 107 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 MGST3O14880 152 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 AREL1O15033 823 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 TEX28O15482 410 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 TMPRSS11DO60235 418 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 TACC1O75410 805 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 LDHAP00338 332 aaKnown RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 CPA3P15088 417 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 BTF3P20290 206 aaKnown RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 SYT1P21579 422 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 ADORA2AP29274 412 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 SERPINB3P29508 390 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 UQCRC1P31930 480 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 EPS15P42566 896 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 CTCFP49711 727 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 GNAQP50148 359 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 GATMP50440 423 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 PGDP52209 483 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms