RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 HSFY1Q96LI6 401 aa9.44□□□□□ -0.9
PTPN20-216ENST00000506080 SLC46A1Q96NT5 459 aa9.44□□□□□ -0.9
PTPN20-216ENST00000506080 ST7Q9NRC1 585 aa9.44□□□□□ -0.9
PTPN20-216ENST00000506080 DNAJC28Q9NX36 388 aa9.44□□□□□ -0.9
PTPN20-216ENST00000506080 USP25Q9UHP3 1055 aa9.44□□□□□ -0.9
PTPN20-216ENST00000506080 SLC25A13Q9UJS0 675 aa9.44□□□□□ -0.9
PTPN20-216ENST00000506080 RCOR1Q9UKL0 485 aa9.44□□□□□ -0.9
PTPN20-216ENST00000506080 PPM1HQ9ULR3 514 aa9.44□□□□□ -0.9
PTPN20-216ENST00000506080 COQ4Q9Y3A0 265 aa9.44□□□□□ -0.9
PTPN20-216ENST00000506080 HEMK1Q9Y5R4 338 aaPredicted RBP9.44□□□□□ -0.9
PTPN20-216ENST00000506080 SYNJ2BP-COX16A0A087WUM0 186 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 NEMP2A6NFY4 417 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 KPNA3O00505 521 aaPredicted RBP9.43□□□□□ -0.9
PTPN20-216ENST00000506080 MCF2LO15068 1137 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 SCAMP1O15126 338 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 WIPF1O43516 503 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 ATP9BO43861 1147 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 HNRNPA2B1P22626 353 aaKnown RBP9.43□□□□□ -0.9
PTPN20-216ENST00000506080 CMA1P23946 247 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 TBXAS1P24557 533 aaPredicted RBP9.43□□□□□ -0.9
PTPN20-216ENST00000506080 SYKP43405 635 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 PLK1P53350 603 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 PITX1P78337 314 aaPredicted RBP9.43□□□□□ -0.9
PTPN20-216ENST00000506080 CENPCQ03188 943 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 DRAP1Q14919 205 aaPredicted RBP9.43□□□□□ -0.9
PTPN20-216ENST00000506080 ZNF284Q2VY69 593 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 OR6B2Q6IFH4 312 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 CXorf57Q6NSI4 855 aaKnown RBP9.43□□□□□ -0.9
PTPN20-216ENST00000506080 GUSBP11Q6P575 273 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 GCNT7Q6ZNI0 430 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 PTAR1Q7Z6K3 402 aaPredicted RBP9.43□□□□□ -0.9
PTPN20-216ENST00000506080 BPHLQ86WA6 291 aaPredicted RBP9.43□□□□□ -0.9
PTPN20-216ENST00000506080 HORMAD1Q86X24 394 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 ATP6V0D2Q8N8Y2 350 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 OR52K2Q8NGK3 314 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 KAT5Q92993 513 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 ARRDC3Q96B67 414 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 PRR11Q96HE9 360 aaPredicted RBP9.43□□□□□ -0.9
PTPN20-216ENST00000506080 COX16Q9P0S2 106 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 CFAP45Q9UL16 551 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 HECTD1Q9ULT8 2610 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 ZFR2Q9UPR6 939 aaKnown RBP9.43□□□□□ -0.9
PTPN20-216ENST00000506080 HPSEQ9Y251 543 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 ENTPD2Q9Y5L3 495 aa9.43□□□□□ -0.9
PTPN20-216ENST00000506080 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.42□□□□□ -0.9
PTPN20-216ENST00000506080 TCAF2A6NFQ2 919 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 CASC3O15234 703 aaKnown RBP9.42□□□□□ -0.9
PTPN20-216ENST00000506080 ALOX15BO15296 676 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 PCDH8O95206 1070 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 TRUB2O95900 331 aaKnown RBP9.42□□□□□ -0.9
PTPN20-216ENST00000506080 CTSLP07711 333 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 CSRP3P50461 194 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 IRAK1P51617 712 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 NDUFA8P51970 172 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 NFKB2Q00653 900 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 CLN3Q13286 438 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 ZNF177Q13360 481 aaPredicted RBP9.42□□□□□ -0.9
PTPN20-216ENST00000506080 PKP1Q13835 747 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 STILQ15468 1287 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 RABGAP1LQ5R372 815 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 SEL1L3Q68CR1 1132 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 MRPL14Q6P1L8 145 aaKnown RBP9.42□□□□□ -0.9
PTPN20-216ENST00000506080 IGF2-ASQ6U949 168 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 Q6ZSR6 202 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 EFL1Q7Z2Z2 1120 aaKnown RBP9.42□□□□□ -0.9
PTPN20-216ENST00000506080 SH2D3CQ8N5H7 860 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 EXD3Q8N9H8 876 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 ZNF548Q8NEK5 533 aaPredicted RBP9.42□□□□□ -0.9
PTPN20-216ENST00000506080 RNF34Q969K3 372 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 ALG14Q96F25 216 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 CCDC97Q96F63 343 aaPredicted RBP9.42□□□□□ -0.9
PTPN20-216ENST00000506080 DUSP23Q9BVJ7 150 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 FAM117AQ9C073 453 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 ZFAND3Q9H8U3 227 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 USP29Q9HBJ7 922 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 IL17BQ9UHF5 180 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 VPS28Q9UK41 221 aa9.42□□□□□ -0.9
PTPN20-216ENST00000506080 A6NNZ2 444 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 CDRT15L2A8MXV6 281 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 KCNU1A8MYU2 1149 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 RNF103O00237 685 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 SART1O43290 800 aaKnown RBP9.41□□□□□ -0.9
PTPN20-216ENST00000506080 LZTS3O60299 673 aaPredicted RBP9.41□□□□□ -0.9
PTPN20-216ENST00000506080 MT-CO1P00395 513 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 CHRNA3P32297 505 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 GPD2P43304 727 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 OXCT1P55809 520 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 HNRNPKP61978 463 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTPN20-216ENST00000506080 DEFB133Q30KQ1 61 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 PERM1Q5SV97 790 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 TTC39BQ5VTQ0 682 aaPredicted RBP9.41□□□□□ -0.9
PTPN20-216ENST00000506080 ATL3Q6DD88 541 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 ZCCHC8Q6NZY4 707 aaKnown RBP9.41□□□□□ -0.9
PTPN20-216ENST00000506080 FBXL22Q6P050 247 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 NEK5Q6P3R8 708 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 RBM44Q6ZP01 1051 aaKnown RBP9.41□□□□□ -0.9
PTPN20-216ENST00000506080 ABI3BPQ7Z7G0 1075 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 PPM1KQ8N3J5 372 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 IFT43Q96FT9 208 aa9.41□□□□□ -0.9
PTPN20-216ENST00000506080 RPRD1AQ96P16 312 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 618.9 ms