RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 CCDC114Q96M63 670 aa8.47□□□□□ -1.05
APP-216ENST00000491395 PCDHB18PQ96TA0 734 aa8.47□□□□□ -1.05
APP-216ENST00000491395 MYOCQ99972 504 aa8.47□□□□□ -1.05
APP-216ENST00000491395 C11orf70Q9BRQ4 267 aa8.47□□□□□ -1.05
APP-216ENST00000491395 ZYG11BQ9C0D3 744 aa8.47□□□□□ -1.05
APP-216ENST00000491395 CAAP1Q9H8G2 361 aa8.47□□□□□ -1.05
APP-216ENST00000491395 ERVMER34-1Q9H9K5 563 aa8.47□□□□□ -1.05
APP-216ENST00000491395 PREBQ9HCU5 417 aa8.47□□□□□ -1.05
APP-216ENST00000491395 FZD3Q9NPG1 666 aa8.47□□□□□ -1.05
APP-216ENST00000491395 NLRC4Q9NPP4 1024 aa8.47□□□□□ -1.05
APP-216ENST00000491395 FANCLQ9NW38 375 aa8.47□□□□□ -1.05
APP-216ENST00000491395 TMEM51Q9NW97 253 aa8.47□□□□□ -1.05
APP-216ENST00000491395 FARP1Q9Y4F1 1045 aaPredicted RBP8.47□□□□□ -1.05
APP-216ENST00000491395 ACTL7AQ9Y615 435 aa8.47□□□□□ -1.05
APP-216ENST00000491395 KNTC1P50748 2209 aa8.47□□□□□ -1.05
APP-216ENST00000491395 FAM72CH0Y354 149 aa8.46□□□□□ -1.06
APP-216ENST00000491395 TRIM38O00635 465 aa8.46□□□□□ -1.06
APP-216ENST00000491395 YKT6O15498 198 aa8.46□□□□□ -1.06
APP-216ENST00000491395 MAGEC1O60732 1142 aa8.46□□□□□ -1.06
APP-216ENST00000491395 LEFTY1O75610 366 aa8.46□□□□□ -1.06
APP-216ENST00000491395 PCDH8O95206 1070 aa8.46□□□□□ -1.06
APP-216ENST00000491395 PRNPP04156 253 aa8.46□□□□□ -1.06
APP-216ENST00000491395 THEGLP0DJG4 465 aa8.46□□□□□ -1.06
APP-216ENST00000491395 JUPP14923 745 aa8.46□□□□□ -1.06
APP-216ENST00000491395 RECQLP46063 649 aaPredicted RBP8.46□□□□□ -1.06
APP-216ENST00000491395 ACADVLP49748 655 aa8.46□□□□□ -1.06
APP-216ENST00000491395 DNA2P51530 1060 aa8.46□□□□□ -1.06
APP-216ENST00000491395 COPB1P53618 953 aaKnown RBP8.46□□□□□ -1.06
APP-216ENST00000491395 JAM2P57087 298 aa8.46□□□□□ -1.06
APP-216ENST00000491395 CLDN2P57739 230 aa8.46□□□□□ -1.06
APP-216ENST00000491395 ARF5P84085 180 aa8.46□□□□□ -1.06
APP-216ENST00000491395 GNA12Q03113 381 aa8.46□□□□□ -1.06
APP-216ENST00000491395 SLC20A2Q08357 652 aa8.46□□□□□ -1.06
APP-216ENST00000491395 OVGP1Q12889 678 aa8.46□□□□□ -1.06
APP-216ENST00000491395 CDO1Q16878 200 aa8.46□□□□□ -1.06
APP-216ENST00000491395 ZNF284Q2VY69 593 aa8.46□□□□□ -1.06
APP-216ENST00000491395 CARD16Q5EG05 197 aa8.46□□□□□ -1.06
APP-216ENST00000491395 ACBD5Q5T8D3 534 aaPredicted RBP8.46□□□□□ -1.06
APP-216ENST00000491395 FAM72AQ5TYM5 149 aa8.46□□□□□ -1.06
APP-216ENST00000491395 SFMBT2Q5VUG0 894 aa8.46□□□□□ -1.06
APP-216ENST00000491395 SEL1L3Q68CR1 1132 aa8.46□□□□□ -1.06
APP-216ENST00000491395 FAM72DQ6L9T8 149 aa8.46□□□□□ -1.06
APP-216ENST00000491395 RETSATQ6NUM9 610 aa8.46□□□□□ -1.06
APP-216ENST00000491395 RWDD4Q6NW29 188 aaKnown RBP8.46□□□□□ -1.06
APP-216ENST00000491395 NEK5Q6P3R8 708 aa8.46□□□□□ -1.06
APP-216ENST00000491395 LEKR1Q6ZMV7 388 aa8.46□□□□□ -1.06
APP-216ENST00000491395 ERN2Q76MJ5 926 aaKnown RBP8.46□□□□□ -1.06
APP-216ENST00000491395 ARCQ7LC44 396 aa8.46□□□□□ -1.06
APP-216ENST00000491395 FAM72BQ86X60 149 aa8.46□□□□□ -1.06
APP-216ENST00000491395 ZNF677Q86XU0 584 aa8.46□□□□□ -1.06
APP-216ENST00000491395 SLC25A45Q8N413 288 aa8.46□□□□□ -1.06
APP-216ENST00000491395 OXR1Q8N573 874 aa8.46□□□□□ -1.06
APP-216ENST00000491395 TMEM145Q8NBT3 493 aa8.46□□□□□ -1.06
APP-216ENST00000491395 GPT2Q8TD30 523 aa8.46□□□□□ -1.06
APP-216ENST00000491395 HNRNPLLQ8WVV9 542 aaKnown RBP8.46□□□□□ -1.06
APP-216ENST00000491395 TSC1Q92574 1164 aa8.46□□□□□ -1.06
APP-216ENST00000491395 HDAC8Q9BY41 377 aa8.46□□□□□ -1.06
APP-216ENST00000491395 ATP13A1Q9HD20 1204 aa8.46□□□□□ -1.06
APP-216ENST00000491395 DYRK4Q9NR20 520 aa8.46□□□□□ -1.06
APP-216ENST00000491395 NDFIP2Q9NV92 336 aa8.46□□□□□ -1.06
APP-216ENST00000491395 PPARGC1AQ9UBK2 798 aaKnown RBP8.46□□□□□ -1.06
APP-216ENST00000491395 OR12D3Q9UGF7 316 aa8.46□□□□□ -1.06
APP-216ENST00000491395 IL36AQ9UHA7 158 aa8.46□□□□□ -1.06
APP-216ENST00000491395 ZFR2Q9UPR6 939 aaKnown RBP8.46□□□□□ -1.06
APP-216ENST00000491395 SIK3Q9Y2K2 1263 aa8.46□□□□□ -1.06
APP-216ENST00000491395 FCF1Q9Y324 198 aaKnown RBP8.46□□□□□ -1.06
APP-216ENST00000491395 GPSM3Q9Y4H4 160 aa8.46□□□□□ -1.06
APP-216ENST00000491395 PCDHGA1Q9Y5H4 931 aa8.46□□□□□ -1.06
APP-216ENST00000491395 WASF2Q9Y6W5 498 aa8.46□□□□□ -1.06
APP-216ENST00000491395 ITPR1Q14643 2758 aa8.45□□□□□ -1.06
APP-216ENST00000491395 ASXL3Q9C0F0 2248 aa8.45□□□□□ -1.06
APP-216ENST00000491395 URB1O60287 2271 aaKnown RBP8.45□□□□□ -1.06
APP-216ENST00000491395 C2CD4BA6NLJ0 364 aa8.45□□□□□ -1.06
APP-216ENST00000491395 SIGLEC6O43699 453 aa8.45□□□□□ -1.06
APP-216ENST00000491395 RFPL3O75679 317 aa8.45□□□□□ -1.06
APP-216ENST00000491395 CD160O95971 181 aa8.45□□□□□ -1.06
APP-216ENST00000491395 C1SP09871 688 aa8.45□□□□□ -1.06
APP-216ENST00000491395 UNGP13051 313 aaPredicted RBP8.45□□□□□ -1.06
APP-216ENST00000491395 RHOQP17081 205 aa8.45□□□□□ -1.06
APP-216ENST00000491395 CKMT2P17540 419 aa8.45□□□□□ -1.06
APP-216ENST00000491395 SDC4P31431 198 aa8.45□□□□□ -1.06
APP-216ENST00000491395 AKT2P31751 481 aa8.45□□□□□ -1.06
APP-216ENST00000491395 GKP32189 559 aa8.45□□□□□ -1.06
APP-216ENST00000491395 RFC1P35251 1148 aaPredicted RBP8.45□□□□□ -1.06
APP-216ENST00000491395 STAT1P42224 750 aa8.45□□□□□ -1.06
APP-216ENST00000491395 SERPINH1P50454 418 aaKnown RBP8.45□□□□□ -1.06
APP-216ENST00000491395 CCDC15Q0P6D6 951 aa8.45□□□□□ -1.06
APP-216ENST00000491395 PTP4A2Q12974 167 aa8.45□□□□□ -1.06
APP-216ENST00000491395 SYCP1Q15431 976 aa8.45□□□□□ -1.06
APP-216ENST00000491395 COL28A1Q2UY09 1125 aa8.45□□□□□ -1.06
APP-216ENST00000491395 ARL13BQ3SXY8 428 aa8.45□□□□□ -1.06
APP-216ENST00000491395 TMEM259Q4ZIN3 620 aa8.45□□□□□ -1.06
APP-216ENST00000491395 FKBP15Q5T1M5 1219 aa8.45□□□□□ -1.06
APP-216ENST00000491395 MANEALQ5VSG8 457 aa8.45□□□□□ -1.06
APP-216ENST00000491395 ZNF783Q6ZMS7 281 aa8.45□□□□□ -1.06
APP-216ENST00000491395 CLEC17AQ6ZS10 378 aa8.45□□□□□ -1.06
APP-216ENST00000491395 NLRP14Q86W24 1093 aa8.45□□□□□ -1.06
APP-216ENST00000491395 TMPRSS12Q86WS5 348 aa8.45□□□□□ -1.06
APP-216ENST00000491395 PCDH20Q8N6Y1 951 aaKnown RBP8.45□□□□□ -1.06
APP-216ENST00000491395 CCDC185Q8N715 623 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms