RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 STAT6P42226 847 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 CLK3P49761 638 aaKnown RBP4.81□□□□□ -1.64
VPS13A-211ENST00000484581 WDR5P61964 334 aaKnown RBP4.81□□□□□ -1.64
VPS13A-211ENST00000484581 PRAMEP78395 509 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 BLOC1S1P78537 153 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 SHC2P98077 582 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 LRMPQ12912 555 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 GAB1Q13480 694 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 CNGA3Q16281 694 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 TBC1D25Q3MII6 688 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 TMEM63BQ5T3F8 832 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 ABHD17BQ5VST6 288 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 KIAA0895LQ68EN5 471 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 TTI2Q6NXR4 508 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 AADACL2Q6P093 401 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 FBXO42Q6P3S6 717 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 ANKRD16Q6P6B7 361 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 KLHL35Q6PF15 583 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 TMEM116Q8NCL8 245 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 CADM4Q8NFZ8 388 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 C2CD4CQ8TF44 421 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 ZNF845Q96IR2 970 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-211ENST00000484581 CNDP2Q96KP4 475 aaKnown RBP4.81□□□□□ -1.64
VPS13A-211ENST00000484581 MAP7D2Q96T17 732 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 THAP7Q9BT49 309 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-211ENST00000484581 STRA6Q9BX79 667 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 KAT14Q9H8E8 782 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 SYBUQ9NX95 663 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 DLL3Q9NYJ7 618 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 SEMA5BQ9P283 1151 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 UPB1Q9UBR1 384 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 TESQ9UGI8 421 aaKnown RBP4.81□□□□□ -1.64
VPS13A-211ENST00000484581 ZHX1Q9UKY1 873 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-211ENST00000484581 ADAM18Q9Y3Q7 739 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 FAM237BA0A1B0GVD1 139 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 A8MZ25 164 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 MCIDASD6RGH6 385 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 UBE2CO00762 179 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 PEX1O43933 1283 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 CEP104O60308 925 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 PAGE4O60829 102 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 CNTN5O94779 1100 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 GALTP07902 379 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 NR2F6P10588 404 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 ENGP17813 658 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 GCH1P30793 250 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 UBA7P41226 1012 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 FOLR3P41439 243 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 ADPRHP54922 357 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 SEMA3AQ14563 771 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 PLCB4Q15147 1175 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 GSTA3Q16772 222 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 GLE1Q53GS7 698 aaKnown RBP4.8□□□□□ -1.64
VPS13A-211ENST00000484581 RAB41Q5JT25 222 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 RTL10Q7L3V2 364 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 SLC46A3Q7Z3Q1 461 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 RNF144BQ7Z419 303 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 NEK8Q86SG6 692 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 TMEM200AQ86VY9 491 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 ARHGAP12Q8IWW6 846 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 CPXM2Q8N436 756 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 SETD9Q8NE22 299 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 MAFAQ8NHW3 353 aaPredicted RBP4.8□□□□□ -1.64
VPS13A-211ENST00000484581 ASB10Q8WXI3 467 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 LINC00476Q8WZB0 136 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 GPR78Q96P69 363 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 ADGRE3Q9BY15 652 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 SH2D4AQ9H788 454 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 SCPEP1Q9HB40 452 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 PDE7BQ9NP56 450 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 C20orf141Q9NUB4 165 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 GAR1Q9NY12 217 aaKnown RBP4.8□□□□□ -1.64
VPS13A-211ENST00000484581 SUCLA2Q9P2R7 463 aaPredicted RBP4.8□□□□□ -1.64
VPS13A-211ENST00000484581 CAPN7Q9Y6W3 813 aa4.8□□□□□ -1.64
VPS13A-211ENST00000484581 A0A1W2PQ09 198 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 A0A1W2PQF6 199 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 FRMD3A2A2Y4 597 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 TTC36A6NLP5 189 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 H0YIZ8 118 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 PRYO14603 147 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 STRNO43815 780 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 HNRNPCL1O60812 293 aaKnown RBP4.79□□□□□ -1.64
VPS13A-211ENST00000484581 TACC1O75410 805 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 PDE8BO95263 885 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 OR2C1O95371 312 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 EGR2P11161 476 aaPredicted RBP4.79□□□□□ -1.64
VPS13A-211ENST00000484581 ITGAMP11215 1152 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 RARGP13631 454 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 APEHP13798 732 aaKnown RBP4.79□□□□□ -1.64
VPS13A-211ENST00000484581 TGM2P21980 687 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 FPR3P25089 353 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 TYK2P29597 1187 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 DPP6P42658 865 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 BLKP51451 505 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 DMWDQ09019 674 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 IRF3Q14653 427 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 TMEM266Q2M3C6 531 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 DPCR1Q3MIW9 517 aa4.79□□□□□ -1.64
VPS13A-211ENST00000484581 RNASE12Q5GAN4 147 aaKnown RBP4.79□□□□□ -1.64
VPS13A-211ENST00000484581 COLEC12Q5KU26 742 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms