RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 PCMTD1Q96MG8 357 aaPredicted RBP12.63□□□□□ -0.39
SBF1-208ENST00000477234 IL12RB2Q99665 862 aa12.63□□□□□ -0.39
SBF1-208ENST00000477234 CALN1Q9BXU9 219 aa12.63□□□□□ -0.39
SBF1-208ENST00000477234 LRRC4Q9HBW1 653 aa12.63□□□□□ -0.39
SBF1-208ENST00000477234 UCKL1Q9NWZ5 548 aa12.63□□□□□ -0.39
SBF1-208ENST00000477234 TEP1Q99973 2627 aaKnown RBP12.62□□□□□ -0.39
SBF1-208ENST00000477234 DOCK9Q9BZ29 2069 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 CPED1A4D0V7 1026 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 A6NNZ2 444 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 LRRIQ3A6PVS8 624 aaPredicted RBP12.62□□□□□ -0.39
SBF1-208ENST00000477234 TTC34A8MYJ7 566 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 ACSL4O60488 711 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 VNN1O95497 513 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 FAM87AP0C7U9 286 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 TGM2P21980 687 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 CD82P27701 267 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 VASPP50552 380 aaPredicted RBP12.62□□□□□ -0.39
SBF1-208ENST00000477234 PITRM1Q5JRX3 1037 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 SIX6OS1Q8N1H7 587 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 SCML4Q8N228 414 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 CARNMT1Q8N4J0 409 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 FBXL13Q8NEE6 735 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 BTN2A2Q8WVV5 523 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 PTPRN2Q92932 1015 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 PRR11Q96HE9 360 aaPredicted RBP12.62□□□□□ -0.39
SBF1-208ENST00000477234 CCDC114Q96M63 670 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 NIF3L1Q9GZT8 377 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 MTG2Q9H4K7 406 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 DNAJC28Q9NX36 388 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 STIM2Q9P246 746 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 HESX1Q9UBX0 185 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 HS3ST3A1Q9Y663 406 aa12.62□□□□□ -0.39
SBF1-208ENST00000477234 RP1L1Q8IWN7 2480 aaPredicted RBP12.61□□□□□ -0.39
SBF1-208ENST00000477234 NVLO15381 856 aaKnown RBP12.61□□□□□ -0.39
SBF1-208ENST00000477234 NRDCO43847 1150 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 TRIM49P0CI25 452 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 TRIM49CP0CI26 452 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 KRT10P13645 584 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 SLC5A2P31639 672 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 DRD3P35462 400 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 GCLMP48507 274 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 GSDMDP57764 484 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 CDKN3Q16667 212 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 FIGNQ5HY92 759 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 BSPRYQ5W0U4 402 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 SMYD5Q6GMV2 418 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 SV2AQ7L0J3 742 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 EFL1Q7Z2Z2 1120 aaKnown RBP12.61□□□□□ -0.39
SBF1-208ENST00000477234 JAMLQ86YT9 394 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 FBXO39Q8N4B4 442 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 ZNF397Q8NF99 534 aaPredicted RBP12.61□□□□□ -0.39
SBF1-208ENST00000477234 NEK11Q8NG66 645 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 ZNF564Q8TBZ8 553 aaPredicted RBP12.61□□□□□ -0.39
SBF1-208ENST00000477234 PDLIM2Q96JY6 352 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 PSMG3-AS1Q96PY0 264 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 EDEM3Q9BZQ6 932 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 PLCB1Q9NQ66 1216 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 CNGB3Q9NQW8 809 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 DYRK4Q9NR20 520 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 SFMBT1Q9UHJ3 866 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 MAN2B2Q9Y2E5 1009 aa12.61□□□□□ -0.39
SBF1-208ENST00000477234 NYNRINQ9P2P1 1898 aaKnown RBP12.61□□□□□ -0.39
SBF1-208ENST00000477234 CLEC18AA5D8T8 446 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 XPO1O14980 1071 aaKnown RBP12.6□□□□□ -0.39
SBF1-208ENST00000477234 TEX33O43247 280 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 RTN2O75298 545 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 LUC7L3O95232 432 aaKnown RBP12.6□□□□□ -0.39
SBF1-208ENST00000477234 HLA-DRAP01903 254 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 PTMAP06454 111 aaKnown RBP12.6□□□□□ -0.39
SBF1-208ENST00000477234 GIMD1P0DJR0 217 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 PBX1P40424 430 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 CASRP41180 1078 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 DLG4P78352 724 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 FOXK1P85037 733 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 NFKB2Q00653 900 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 PPP3CAQ08209 521 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 SYCP1Q15431 976 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 TSR1Q2NL82 804 aaKnown RBP12.6□□□□□ -0.39
SBF1-208ENST00000477234 ARHGAP17Q68EM7 881 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 ESRP1Q6NXG1 681 aaKnown RBP12.6□□□□□ -0.39
SBF1-208ENST00000477234 MSANTD2Q6P1R3 559 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 RFWD3Q6PCD5 774 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 CLEC18BQ6UXF7 455 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 ABI3BPQ7Z7G0 1075 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 PARGQ86W56 976 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 CLEC18CQ8NCF0 446 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 WFDC5Q8TCV5 224 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 ARRDC3Q96B67 414 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 LMLNQ96KR4 655 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 TMEM74Q96NL1 305 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 TWNKQ96RR1 684 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 B3GNT4Q9C0J1 378 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 NUCKS1Q9H1E3 243 aaKnown RBP12.6□□□□□ -0.39
SBF1-208ENST00000477234 MMRN2Q9H8L6 949 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 IPO11Q9UI26 975 aaKnown RBP12.6□□□□□ -0.39
SBF1-208ENST00000477234 INTS6Q9UL03 887 aaKnown RBP12.6□□□□□ -0.39
SBF1-208ENST00000477234 COQ4Q9Y3A0 265 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 TRPM6Q9BX84 2022 aa12.6□□□□□ -0.39
SBF1-208ENST00000477234 ICE1Q9Y2F5 2266 aa12.59□□□□□ -0.39
SBF1-208ENST00000477234 LY6G6EA0A0G2JKS1 128 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms