RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, human

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRAT1-205	ENST00000473879	BHMT	Q93088	406 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	MYEOV	Q96EZ4	313 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	LMLN	Q96KR4	655 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	OLFM3	Q96PB7	478 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	RHOXF2	Q9BQY4	288 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	LRRC1	Q9BTT6	524 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	SLC2A11	Q9BYW1	496 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	SAE1	Q9UBE0	346 aa	Predicted RBP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	UTP11	Q9Y3A2	253 aa	Known RBP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879		V9GYY5	206 aa	Predicted RBP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	DNAH14	Q0VDD8	3507 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	CHD5	Q8TDI0	1954 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	UQCRHL	A0A096LP55	91 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879		A0A1B0GVM2	712 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	BCLAF3	A2AJT9	711 aa	Known RBP	13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	TCAF2	A6NFQ2	919 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	PRRT4	C9JH25	899 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	SGK1	O00141	431 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	TTI1	O43156	1089 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	CLDN11	O75508	207 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	HEXIM1	O94992	359 aa	Known RBP	13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	UQCRH	P07919	91 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	HOXD9	P28356	352 aa	Predicted RBP	13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	KCNJ1	P48048	391 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	NDST2	P52849	883 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	GALNT2	Q10471	571 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	SRSF5	Q13243	272 aa	Known RBP	13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	SLC45A4	Q5BKX6	768 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	LAIR1	Q6GTX8	287 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	RFWD3	Q6PCD5	774 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	TMEM92	Q6UXU6	159 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	PRR23B	Q6ZRT6	265 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	RASSF3	Q86WH2	238 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	JAML	Q86YT9	394 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	LRRC49	Q8IUZ0	686 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	DDI1	Q8WTU0	396 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	TFB1M	Q8WVM0	346 aa	Known RBP	13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	IGSF8	Q969P0	613 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	POLM	Q9NP87	494 aa	Predicted RBP	13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	MPP6	Q9NZW5	540 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	NCDN	Q9UBB6	729 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	HCN2	Q9UL51	889 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	MFHAS1	Q9Y4C4	1052 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	FAM186A	A6NE01	2351 aa		13.55	□□□□□ -0.24
BRAT1-205	ENST00000473879	MTSS1	O43312	755 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	ADAM23	O75077	832 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	RPP40	O75818	363 aa	Known RBP	13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	ALDH1A2	O94788	518 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	NTSR1	P30989	418 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	STIP1	P31948	543 aa	Known RBP	13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	ACTN2	P35609	894 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	PTGIR	P43119	386 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	SGSH	P51688	502 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	ZNF33A	Q06730	810 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	SLC10A2	Q12908	348 aa	Predicted RBP	13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	PTK6	Q13882	451 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	ELF2	Q15723	593 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	ALF	Q53S48	1182 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	CEP68	Q76N32	757 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	TFAP2D	Q7Z6R9	452 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	UMODL1-AS1	Q8N2C9	162 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	ATPAF2	Q8N5M1	289 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	NPW	Q8N729	165 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	CCDC89	Q8N998	374 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	HDAC11	Q96DB2	347 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	TMA16	Q96EY4	203 aa	Known RBP	13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	HINFP	Q9BQA5	517 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	TMEM121	Q9BTD3	319 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	GMEB2	Q9UKD1	530 aa		13.54	□□□□□ -0.24
BRAT1-205	ENST00000473879	OTOGL	Q3ZCN5	2332 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	ARHGAP42	A6NI28	874 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	NDC80	O14777	642 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	NPC1	O15118	1278 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	TSPAN3	O60637	253 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	RAMP2	O60895	175 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	CNTN5	O94779	1100 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	STK10	O94804	968 aa	Known RBP	13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	MAP3K6	O95382	1288 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	RET	P07949	1114 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	C7	P10643	843 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	OR1E1	P30953	314 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	ETFB	P38117	255 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	GARS	P41250	739 aa	Known RBP	13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	YBEY	P58557	167 aa	Predicted RBP	13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	PPID	Q08752	370 aa	Known RBP	13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	ZNF177	Q13360	481 aa	Predicted RBP	13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	PRKD1	Q15139	912 aa	Predicted RBP	13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	E2F5	Q15329	346 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	GEN1	Q17RS7	908 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	PARP15	Q460N3	678 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	C6orf118	Q5T5N4	469 aa		13.53	□□□□□ -0.24
BRAT1-205	ENST00000473879	AFMID	Q63HM1	303 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms