RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 DCAF4L2Q8NA75 395 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 EPS8L1Q8TE68 723 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 RXFP2Q8WXD0 754 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 ATP13A1Q9HD20 1204 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 METTL5Q9NRN9 209 aaKnown RBP13.57□□□□□ -0.24
CPSF4-210ENST00000469897 DKK4Q9UBT3 224 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 ZNF212Q9UDV6 495 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 ZFR2Q9UPR6 939 aaKnown RBP13.57□□□□□ -0.24
CPSF4-210ENST00000469897 ACTL7AQ9Y615 435 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 TRIM38O00635 465 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 CDK4P11802 303 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 ADRA1BP35368 520 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 POLR2FP61218 127 aaKnown RBP13.56□□□□□ -0.24
CPSF4-210ENST00000469897 GNA12Q03113 381 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 COL9A2Q14055 689 aaPredicted RBP13.56□□□□□ -0.24
CPSF4-210ENST00000469897 NUMA1Q14980 2115 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 CDO1Q16878 200 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 C15orf59Q2T9L4 293 aaPredicted RBP13.56□□□□□ -0.24
CPSF4-210ENST00000469897 CCDC14Q49A88 953 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 CARD16Q5EG05 197 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 CT47A1Q5JQC4 288 aaPredicted RBP13.56□□□□□ -0.24
CPSF4-210ENST00000469897 SEL1L3Q68CR1 1132 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 RETSATQ6NUM9 610 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 C22orf39Q6P5X5 142 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 ARCQ7LC44 396 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 PDZD3Q86UT5 571 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 TMEM145Q8NBT3 493 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 MSANTD4Q8NCY6 345 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 OR13H1Q8NG92 308 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 SLC30A5Q8TAD4 765 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 ENOX1Q8TC92 643 aaKnown RBP13.56□□□□□ -0.24
CPSF4-210ENST00000469897 LRIG1Q96JA1 1093 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 HDAC8Q9BY41 377 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 GANQ9H2C0 597 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 NLRC4Q9NPP4 1024 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 FAM207AQ9NSI2 230 aaPredicted RBP13.56□□□□□ -0.24
CPSF4-210ENST00000469897 NDFIP2Q9NV92 336 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 UCKL1Q9NWZ5 548 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 PPARGC1AQ9UBK2 798 aaKnown RBP13.56□□□□□ -0.24
CPSF4-210ENST00000469897 OR12D3Q9UGF7 316 aa13.56□□□□□ -0.24
CPSF4-210ENST00000469897 FCF1Q9Y324 198 aaKnown RBP13.56□□□□□ -0.24
CPSF4-210ENST00000469897 FAM72CH0Y354 149 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 SIGLEC6O43699 453 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 GJB6O95452 261 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 PAK4O96013 591 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-210ENST00000469897 CYP1A1P04798 512 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-210ENST00000469897 MMP8P22894 467 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 DGKAP23743 735 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 AKT2P31751 481 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 HNF1BP35680 557 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 ACVRL1P37023 503 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 ARF5P84085 180 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 CDR2Q01850 454 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 MAPK8IP2Q13387 824 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-210ENST00000469897 ZNF542PQ5EBM4 170 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 HES3Q5TGS1 186 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 FAM72AQ5TYM5 149 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 FAM72DQ6L9T8 149 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 RWDD4Q6NW29 188 aaKnown RBP13.55□□□□□ -0.24
CPSF4-210ENST00000469897 FBXL19Q6PCT2 694 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 ZNF783Q6ZMS7 281 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 LEKR1Q6ZMV7 388 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 FAM72BQ86X60 149 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 ZNF677Q86XU0 584 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 JOSD2Q8TAC2 188 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 GPT2Q8TD30 523 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 HEPHQ9BQS7 1158 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 CALN1Q9BXU9 219 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 SLC17A9Q9BYT1 436 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 KLHL11Q9NVR0 708 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 FANCLQ9NW38 375 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 DNAI1Q9UI46 699 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 NOCTQ9UK39 431 aaKnown RBP13.55□□□□□ -0.24
CPSF4-210ENST00000469897 AK5Q9Y6K8 562 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 WASF2Q9Y6W5 498 aa13.55□□□□□ -0.24
CPSF4-210ENST00000469897 EPHB6O15197 1021 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 CD160O95971 181 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 HNRNPA2B1P22626 353 aaKnown RBP13.54□□□□□ -0.24
CPSF4-210ENST00000469897 L1CAMP32004 1257 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 GKP32189 559 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 SOX5P35711 763 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 SERPINH1P50454 418 aaKnown RBP13.54□□□□□ -0.24
CPSF4-210ENST00000469897 FMO1Q01740 532 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 SEMG2Q02383 582 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 ZNF211Q13398 564 aaPredicted RBP13.54□□□□□ -0.24
CPSF4-210ENST00000469897 KRT31Q15323 416 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 PROX2Q3B8N5 592 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 ARL13BQ3SXY8 428 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 Q6ZSR6 202 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 RYBPQ8N488 228 aaPredicted RBP13.54□□□□□ -0.24
CPSF4-210ENST00000469897 PCDH20Q8N6Y1 951 aaKnown RBP13.54□□□□□ -0.24
CPSF4-210ENST00000469897 PPP1R16AQ96I34 528 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 FEM1CQ96JP0 617 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 BMFQ96LC9 184 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 PCDHB18PQ96TA0 734 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 C11orf70Q9BRQ4 267 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 CEP44Q9C0F1 390 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 OSBPL2Q9H1P3 480 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 LMBRD1Q9NUN5 540 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms