RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ST8SIA4Q92187 359 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 SKA1Q96BD8 255 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 ERO1AQ96HE7 468 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 AGAP2Q99490 1192 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 HDHD5Q9BXW7 423 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 SCAND2PQ9GZW5 306 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 CNOT7Q9UIV1 285 aaKnown RBP4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 SLC25A13Q9UJS0 675 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 HSF4Q9ULV5 492 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 ATP6V1DQ9Y5K8 247 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 KIF1BO60333 1816 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 WDR33Q9C0J8 1336 aaKnown RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 RRHO14718 337 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 SYN3O14994 580 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 USP12O75317 370 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 MBD4O95243 580 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 TPM1P09493 284 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 CCDC172P0C7W6 258 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 ARSAP15289 507 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 TNFAIP3P21580 790 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 PPP2R1AP30153 589 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 GPD2P43304 727 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 SSR1P43307 286 aaKnown RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 SOX2P48431 317 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 ELLP55199 621 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 TUBA4AP68366 448 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 TRDNQ13061 729 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 BAK1Q16611 211 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 STRIP1Q5VSL9 837 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 MTFR2Q6P444 385 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 RTL10Q7L3V2 364 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 MDGA2Q7Z553 956 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 TFAP2DQ7Z6R9 452 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 TMEM200AQ86VY9 491 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 PAQR4Q8N4S7 273 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 FAM98AQ8NCA5 519 aaKnown RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 LSM14AQ8ND56 463 aaKnown RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZFPM2Q8WW38 1151 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 RRP36Q96EU6 259 aaKnown RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 RNFT2Q96EX2 444 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZNF347Q96SE7 839 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 PHF7Q9BWX1 381 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 KRTAP4-9Q9BYQ8 210 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 PAIP1Q9H074 479 aaKnown RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 TLR8Q9NR97 1041 aaKnown RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 RSPH14Q9UHP6 348 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZNHIT2Q9UHR6 403 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 ARHGAP26Q9UNA1 814 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 DTX4Q9Y2E6 619 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 PKP3Q9Y446 797 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 N4BP2Q86UW6 1770 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 SSH2Q76I76 1423 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 IFT172Q9UG01 1749 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 TRPM2O94759 1503 aa4.77□□□□□ -1.65
HMGB1P16-201ENST00000447155 KIF20BQ96Q89 1820 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 AOX1Q06278 1338 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 FANCAO15360 1455 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 ERCC6Q03468 1493 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 MAGI2Q86UL8 1455 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 TCHHQ07283 1943 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 SH2D7A6NKC9 451 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 IPO8O15397 1037 aaKnown RBP4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 TULP3O75386 442 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 BCAR3O75815 825 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 ADCY5O95622 1261 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 CAVIN2O95810 425 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 ATP1A3P13637 1013 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 RPS6KB1P23443 525 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 PRKCHP24723 683 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 GSTM2P28161 218 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 TDO2P48775 406 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 PTH2RP49190 550 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 GEMIN4P57678 1058 aaKnown RBP4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 ARHGAP8P85298 464 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 GALNT2Q10471 571 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 SEC23BQ15437 767 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 GPR68Q15743 365 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 SLC9C2Q5TAH2 1124 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZNF813Q6ZN06 617 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 RBM44Q6ZP01 1051 aaKnown RBP4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 RSRC2Q7L4I2 434 aaKnown RBP4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 RPAINQ86UA6 219 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 WDR63Q8IWG1 891 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 BRSK2Q8IWQ3 736 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 VPS52Q8N1B4 723 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 BOLLQ8N9W6 283 aaKnown RBP4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 FAM47BQ8NA70 645 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 SLC16A11Q8NCK7 471 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 OR52N4Q8NGI2 321 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 GOLGA5Q8TBA6 731 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 KIAA1524Q8TCG1 905 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 NCSTNQ92542 709 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 PIGKQ92643 395 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 KAT2BQ92831 832 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 CHFRQ96EP1 664 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 ADAD1Q96M93 576 aaKnown RBP4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 FCRL5Q96RD9 977 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms