RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 HABP2Q14520 560 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 KCNAB1Q14722 419 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 NCAPHQ15003 741 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SLC39A14Q15043 492 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ADRM1Q16186 407 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SLFN13Q68D06 897 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 TEPPQ6URK8 271 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 PIK3AP1Q6ZUJ8 805 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 R3HCC1LQ7Z5L2 792 aaKnown RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 CAMK1DQ8IU85 385 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZDHHC17Q8IUH5 632 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 CLVS1Q8IUQ0 354 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 PSTKQ8IV42 348 aaKnown RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 TRIM59Q8IWR1 403 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 MCEMP1Q8IX19 187 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 KREMEN2Q8NCW0 462 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 HIPK4Q8NE63 616 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SLC24A4Q8NFF2 622 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 OR9A1PQ8NGU1 263 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 FANK1Q8TC84 345 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 Q8TCH9 128 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 HCAR2Q8TDS4 363 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 UCMAQ8WVF2 138 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ASZ1Q8WWH4 475 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 METTL21AQ8WXB1 218 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 HDAC10Q969S8 669 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 RAD51AP1Q96B01 352 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 RMDN1Q96DB5 314 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZNF274Q96GC6 653 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 TOE1Q96GM8 510 aaKnown RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ERO1AQ96HE7 468 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 HES6Q96HZ4 224 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 AK8Q96MA6 479 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 CFAP57Q96MR6 1250 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 CAMK1GQ96NX5 476 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SLC2A13Q96QE2 648 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SH3GL2Q99962 352 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 CITED2Q99967 270 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 CCDC77Q9BR77 488 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SPXQ9BT56 116 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SYNDIG1Q9H7V2 258 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SLC38A10Q9HBR0 1119 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SARS2Q9NP81 518 aaKnown RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZBTB40Q9NUA8 1239 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ORC3Q9UBD5 711 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SAP30BPQ9UHR5 308 aaKnown RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 STX8Q9UNK0 236 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 SLC8A2Q9UPR5 921 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 DTX4Q9Y2E6 619 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ANKRD6Q9Y2G4 727 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 DNAJC16Q9Y2G8 782 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 DLGAP4Q9Y2H0 992 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 TESMINQ9Y4I5 508 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 PCDHGA1Q9Y5H4 931 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 NR2E3Q9Y5X4 410 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 PIAS3Q9Y6X2 628 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 CEP350Q5VT06 3117 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 KIF24Q5T7B8 1368 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 NPHP4O75161 1426 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 CDK12Q9NYV4 1490 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 KDM5DQ9BY66 1539 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 MYO3AQ8NEV4 1616 aa4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZNF142P52746 1687 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P9-201ENST00000441799 A0A1W2PPH5 198 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 A0A1W2PQ67 120 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 LOC390937A0A1W2PQ73 354 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 KANSL1LA0AUZ9 987 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 XKRY2A2RUG3 117 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 MIF4GDA9UHW6 222 aaKnown RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 K7ERQ8 282 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 ECE2O60344 883 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 CRYZL1O95825 349 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 FGF4P08620 206 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 KRT7P08729 469 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 DHRS4L1P0CG22 281 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 CCDC192P0DO97 292 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 PF4V1P10720 104 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 RFC1P35251 1148 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 HOXD13P35453 343 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 ETV5P41161 510 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 RECQLP46063 649 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 ARCN1P48444 511 aaKnown RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 CASP5P51878 434 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 SRP54P61011 504 aaKnown RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 IFI35P80217 286 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 MRPS25P82663 173 aaKnown RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 ARF5P84085 180 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 TAP2Q03519 686 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 PPARAQ07869 468 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 SCRN3Q0VDG4 424 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 NFATC3Q12968 1075 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 CAMK2DQ13557 499 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 CUL4AQ13619 759 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 SF3B4Q15427 424 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 SGSM1Q2NKQ1 1148 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 PARP6Q2NL67 630 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 C2orf76Q3KRA6 126 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 FSCBQ5H9T9 825 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 FAM76BQ5HYJ3 339 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 TOR1AIP1Q5JTV8 583 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms