RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PLD4Q96BZ4 506 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 ATXN3LQ9H3M9 355 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 AHSPQ9NZD4 102 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 PADI3Q9ULW8 664 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-208ENST00000430669 C15orf38-AP3S2A0A0A6YYH1 394 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 A0A1W2PQ67 120 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 NEPROQ6NW34 567 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 ARPINQ7Z6K5 226 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 KCNV2Q8TDN2 545 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 KLHL4Q9C0H6 718 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 COG4Q9H9E3 785 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 TEKT2Q9UIF3 430 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 COG5Q9UP83 839 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 C2CD4BA6NLJ0 364 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 CLDN5O00501 218 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 PAGE1O75459 146 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 TGDSO95455 350 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 STAU1O95793 577 aaKnown RBP11.7□□□□□ -0.54
PTCH1-208ENST00000430669 OCA2Q04671 838 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 CLEC4FQ8N1N0 589 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 KIF2BQ8N4N8 673 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 CNDP1Q96KN2 507 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 NDEL1Q9GZM8 345 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 CDHR5Q9HBB8 845 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 USP1O94782 785 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 NDST2P52849 883 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 ADRM1Q16186 407 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 IQCKQ8N0W5 287 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 PIWIL2Q8TC59 973 aaKnown RBP11.7□□□□□ -0.54
PTCH1-208ENST00000430669 TCRBV9S1A1TA0A576 114 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 HPCAP84074 193 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 SP2Q02086 613 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 WASHC5Q12768 1159 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 PKN2Q16513 984 aaKnown RBP11.7□□□□□ -0.54
PTCH1-208ENST00000430669 LRRC8DQ7L1W4 858 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 RRM2BQ7LG56 351 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 GPSM1Q86YR5 675 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 OR52K1Q8NGK4 314 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 LTA4HP09960 611 aaKnown RBP11.7□□□□□ -0.54
PTCH1-208ENST00000430669 HOXB6P17509 224 aaKnown RBP11.7□□□□□ -0.54
PTCH1-208ENST00000430669 LAG3P18627 525 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 TTC30BQ8N4P2 665 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 ANLNQ9NQW6 1124 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 GTF2IRD1Q9UHL9 959 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 ZMYM5Q9UJ78 669 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 CLCA2Q9UQC9 943 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 SLC35G1Q2M3R5 365 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 GALNTL6Q49A17 601 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 LPCAT1Q8NF37 534 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 PIK3R5Q8WYR1 880 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 DLG3Q92796 817 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 FAM126AQ9BYI3 521 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-208ENST00000430669 GDAP2Q9NXN4 497 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 LGALS13Q9UHV8 139 aa11.7□□□□□ -0.54
PTCH1-208ENST00000430669 STK25O00506 426 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 CLDN11O75508 207 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 CRHR1P34998 444 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 TP53BP2Q13625 1128 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 PSMD5Q16401 504 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 PMF1Q6P1K2 205 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 COL6A2P12110 1019 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 ERCC2P18074 760 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 GABRB2P47870 512 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 CLCNKBP51801 687 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 CNTN1Q12860 1018 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 TEX44Q53QW1 395 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 PATL1Q86TB9 770 aaKnown RBP11.69□□□□□ -0.54
PTCH1-208ENST00000430669 AADATQ8N5Z0 425 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 HIPK3Q9H422 1215 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 RPL26L1Q9UNX3 145 aaKnown RBP11.69□□□□□ -0.54
PTCH1-208ENST00000430669 CCNCP24863 283 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 PEX19P40855 299 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 CRYMQ14894 314 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 GRAMD4Q6IC98 578 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 PLD5Q8N7P1 536 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 MCOLN3Q8TDD5 553 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 ERVK-5Q9HDB9 667 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 AP2A1O95782 977 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 L1CAMP32004 1257 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 HOXD13P35453 343 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 CCR3P51677 355 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 TMEM159Q96B96 161 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 PRDM12Q9H4Q4 367 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 VNN1O95497 513 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 ETS1P14921 441 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 KCNA4P22459 653 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 ZBTB41Q5SVQ8 909 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 CEP70Q8NHQ1 597 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 RGS14O43566 566 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 KIF1CO43896 1103 aaKnown RBP11.69□□□□□ -0.54
PTCH1-208ENST00000430669 TLR5O60602 858 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 ZSCAN5DPP0CG00 497 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 FGFR1P11362 822 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 DPYSL2Q16555 572 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 PIWIL4Q7Z3Z4 852 aaKnown RBP11.69□□□□□ -0.54
PTCH1-208ENST00000430669 FIBCD1Q8N539 461 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 ELOVL6Q9H5J4 265 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 LRRC4CQ9HCJ2 640 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 RPL14P50914 215 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms