RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ERCC6LQ2NKX8 1250 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 FAM153CQ494X1 144 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 TSTD2Q5T7W7 516 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 ACAD10Q6JQN1 1059 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 TMEM88Q6PEY1 159 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 DCDC5Q6ZRR9 648 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 LRRC8DQ7L1W4 858 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 GALNT4Q8N4A0 578 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 LARP4BQ92615 738 aaKnown RBP6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 RNF125Q96EQ8 232 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 MASTLQ96GX5 879 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 GPR78Q96P69 363 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 BBC3Q96PG8 261 aaPredicted RBP6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 PHF7Q9BWX1 381 aaPredicted RBP6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 SYNPO2LQ9H987 977 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 THAP1Q9NVV9 213 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 GAR1Q9NY12 217 aaKnown RBP6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 HEG1Q9ULI3 1381 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 NRXN2Q9P2S2 1712 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 NPIPB13A6NJU9 1138 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 NPIPB5A8MRT5 1133 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 NPIPB4C9JG80 1138 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 H3BNC9 293 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 BAIAP3O94812 1187 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 BDNFP23560 247 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 CTCFP49711 727 aaPredicted RBP6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 RARRES1P49788 294 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 CASP6P55212 293 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 SHC2P98077 582 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 B4GALNT1Q00973 533 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 KCNB1Q14721 858 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 GPR68Q15743 365 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 RUNDC3AQ59EK9 446 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 TMEM63BQ5T3F8 832 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 TMEM65Q6PI78 240 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 ITIH6Q6UXX5 1313 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 DSTYKQ6XUX3 929 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 Q6ZPA2 131 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 ZNF627Q7L945 461 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 ULK2Q8IYT8 1036 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 ADGRF3Q8IZF5 1079 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 CNTROBQ8N137 903 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 CNBD1Q8NA66 436 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 SNED1Q8TER0 1413 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 TBC1D22AQ8WUA7 517 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 RFFLQ8WZ73 363 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 KCNJ9Q92806 393 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 ZBTB10Q96DT7 871 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 DAZAP1Q96EP5 407 aaKnown RBP6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 ALG13Q9NP73 1137 aaKnown RBP6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 ASNSD1Q9NWL6 643 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 KNSTRNQ9Y448 316 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 CYP46A1Q9Y6A2 500 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 ARFGEF1Q9Y6D6 1849 aa6.12□□□□□ -1.43
RNU4-39P-201ENST00000362455 CEMIPQ8WUJ3 1361 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 RNF123Q5XPI4 1314 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 HNRNPCP07910 306 aaKnown RBP eCLIP6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 PRPH2P23942 346 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 ABCD3P28288 659 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 MCM7P33993 719 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 EPHX2P34913 555 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 HOXD12P35452 270 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 VPS41P49754 854 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 CCT4P50991 539 aaKnown RBP6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 TBL3Q12788 808 aaKnown RBP6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 TDGQ13569 410 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 LARS2Q15031 903 aaKnown RBP6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 HLFQ16534 295 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 BAK1Q16611 211 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 NFIL3Q16649 462 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 CST9Q5W186 159 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 CEP85Q6P2H3 762 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 TRIM72Q6ZMU5 477 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 GRASPQ7Z6J2 395 aaPredicted RBP6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 TTC5Q8N0Z6 440 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 ENDOVQ8N8Q3 282 aaKnown RBP6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 LSM14AQ8ND56 463 aaKnown RBP6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 ADPRHL1Q8NDY3 354 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 UCMAQ8WVF2 138 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 RNFT2Q96EX2 444 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 ABHD8Q96I13 439 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 APOPT1Q96IL0 206 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 ZNF845Q96IR2 970 aaPredicted RBP6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 HIC2Q96JB3 615 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 HDHD5Q9BXW7 423 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 TOR3AQ9H497 397 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 SFXN1Q9H9B4 322 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 SLC22A11Q9NSA0 550 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 CNOT7Q9UIV1 285 aaKnown RBP6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 CD207Q9UJ71 328 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 SUFUQ9UMX1 484 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 ENTPD2Q9Y5L3 495 aa6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 HEMK1Q9Y5R4 338 aaPredicted RBP6.11□□□□□ -1.43
RNU4-39P-201ENST00000362455 KIF7Q2M1P5 1343 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 TCRBV5S1A1TA0A578 114 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 C16orf96A6NNT2 1141 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 GCATO75600 419 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 ALDOCP09972 364 aaKnown RBP6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 CYP2D6P10635 497 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms