RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 MAXP61244 160 aa18.94■□□□□ 0.62
CLN3-206ENST00000360019 OLIG2Q13516 323 aa18.94■□□□□ 0.62
CLN3-206ENST00000360019 SPARCL1Q14515 664 aa18.94■□□□□ 0.62
CLN3-206ENST00000360019 KYNUQ16719 465 aa18.94■□□□□ 0.62
CLN3-206ENST00000360019 ATAT1Q5SQI0 421 aa18.94■□□□□ 0.62
CLN3-206ENST00000360019 LY6G5CQ5SRR4 150 aa18.94■□□□□ 0.62
CLN3-206ENST00000360019 ZBED8Q8IZ13 594 aa18.94■□□□□ 0.62
CLN3-206ENST00000360019 PGBD5Q8N414 524 aa18.94■□□□□ 0.62
CLN3-206ENST00000360019 ST13P5Q8NFI4 369 aaPredicted RBP18.94■□□□□ 0.62
CLN3-206ENST00000360019 FIBINQ8TAL6 211 aa18.94■□□□□ 0.62
CLN3-206ENST00000360019 FRMD8Q9BZ67 464 aaPredicted RBP18.94■□□□□ 0.62
CLN3-206ENST00000360019 UBP1Q9NZI7 540 aa18.94■□□□□ 0.62
CLN3-206ENST00000360019 VPS28Q9UK41 221 aa18.94■□□□□ 0.62
CLN3-206ENST00000360019 DOCK8Q8NF50 2099 aa18.94■□□□□ 0.62
CLN3-206ENST00000360019 NEDD8-MDP1E9PL57 170 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 AGPSO00116 658 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 MUSKO15146 869 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 EIF3HO15372 352 aaKnown RBP eCLIP18.93■□□□□ 0.62
CLN3-206ENST00000360019 ZMPSTE24O75844 475 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 SUN1O94901 812 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 TTC4O95801 387 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 POU3F3P20264 500 aaPredicted RBP18.93■□□□□ 0.62
CLN3-206ENST00000360019 MLLT1Q03111 559 aaPredicted RBP18.93■□□□□ 0.62
CLN3-206ENST00000360019 LMAN2Q12907 356 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 CBLBQ13191 982 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 SLC29A2Q14542 456 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 BBS9Q3SYG4 887 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 CES5AQ6NT32 575 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 ASIC4Q96FT7 647 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 LMLNQ96KR4 655 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 BBS2Q9BXC9 721 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 TRPV4Q9HBA0 871 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 CDH7Q9ULB5 785 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 PLAAQ9Y263 795 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 GOLGA6BA6NDN3 693 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 SOX1O00570 391 aaPredicted RBP18.93■□□□□ 0.62
CLN3-206ENST00000360019 SLC9A3R1O14745 358 aaPredicted RBP18.93■□□□□ 0.62
CLN3-206ENST00000360019 ACSL3O95573 720 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 CD160O95971 181 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 MT-CYBP00156 380 aaPredicted RBP18.93■□□□□ 0.62
CLN3-206ENST00000360019 CD70P32970 193 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 PRPSAP1Q14558 356 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 COL19A1Q14993 1142 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 ALS2CLQ60I27 953 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 EP400NLQ6ZTU2 488 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 ANKMY2Q8IV38 441 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 APCDD1Q8J025 514 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 KIAA1958Q8N8K9 716 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 DCAF4L2Q8NA75 395 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 OR2W6PQ8NHA6 318 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 BPIFB1Q8TDL5 484 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 OSCP1Q8WVF1 389 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 MARK1Q9P0L2 795 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 UBA2Q9UBT2 640 aaPredicted RBP18.93■□□□□ 0.62
CLN3-206ENST00000360019 NFS1Q9Y697 457 aa18.93■□□□□ 0.62
CLN3-206ENST00000360019 ERI2A8K979 691 aaKnown RBP18.92■□□□□ 0.62
CLN3-206ENST00000360019 USP12O75317 370 aa18.92■□□□□ 0.62
CLN3-206ENST00000360019 TYRP14679 529 aa18.92■□□□□ 0.62
CLN3-206ENST00000360019 NIPAL4Q0D2K0 466 aa18.92■□□□□ 0.62
CLN3-206ENST00000360019 TRIM68Q6AZZ1 485 aa18.92■□□□□ 0.62
CLN3-206ENST00000360019 IGDCC3Q8IVU1 814 aa18.92■□□□□ 0.62
CLN3-206ENST00000360019 CCDC117Q8IWD4 279 aaPredicted RBP18.92■□□□□ 0.62
CLN3-206ENST00000360019 MSLNLQ96KJ4 702 aa18.92■□□□□ 0.62
CLN3-206ENST00000360019 MYADMQ96S97 322 aa18.92■□□□□ 0.62
CLN3-206ENST00000360019 SLC25A51Q9H1U9 297 aa18.92■□□□□ 0.62
CLN3-206ENST00000360019 XAB2Q9HCS7 855 aaKnown RBP18.92■□□□□ 0.62
CLN3-206ENST00000360019 PIH1D1Q9NWS0 290 aaKnown RBP18.92■□□□□ 0.62
CLN3-206ENST00000360019 DUS2Q9NX74 493 aaKnown RBP18.92■□□□□ 0.62
CLN3-206ENST00000360019 KIAA1522Q9P206 1035 aaPredicted RBP18.92■□□□□ 0.62
CLN3-206ENST00000360019 VPS51Q9UID3 782 aa18.92■□□□□ 0.62
CLN3-206ENST00000360019 INTS6Q9UL03 887 aaKnown RBP18.92■□□□□ 0.62
CLN3-206ENST00000360019 TEX264Q9Y6I9 313 aa18.92■□□□□ 0.62
CLN3-206ENST00000360019 TTC24A2A3L6 582 aaPredicted RBP18.91■□□□□ 0.62
CLN3-206ENST00000360019 HEPACAM2A8MVW5 462 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 GJB3O75712 270 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 ANXA9O76027 345 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 NUDT17P0C025 328 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 MLNP12872 115 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 IGFBP4P22692 258 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 HLA-FP30511 346 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 FAM193AP78312 1265 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 SARNPP82979 210 aaKnown RBP18.91■□□□□ 0.62
CLN3-206ENST00000360019 DSC2Q02487 901 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 ZNF235Q14590 738 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 IHHQ14623 411 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 EML3Q32P44 896 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 DENND2CQ68D51 928 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 ASTLQ6HA08 431 aaPredicted RBP18.91■□□□□ 0.62
CLN3-206ENST00000360019 LRRC8BQ6P9F7 803 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 LINGO4Q6UY18 593 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 PRPF39Q86UA1 669 aaKnown RBP18.91■□□□□ 0.62
CLN3-206ENST00000360019 FBXO36Q8NEA4 188 aa18.91■□□□□ 0.62
CLN3-206ENST00000360019 UHMK1Q8TAS1 419 aaKnown RBP18.91■□□□□ 0.62
CLN3-206ENST00000360019 IMP4Q96G21 291 aaKnown RBP18.91■□□□□ 0.62
CLN3-206ENST00000360019 AAR2Q9Y312 384 aaKnown RBP18.91■□□□□ 0.62
CLN3-206ENST00000360019 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.91■□□□□ 0.62
CLN3-206ENST00000360019 SHBGP04278 402 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 MMP2P08253 660 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 ELK3P41970 407 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 ITKQ08881 620 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms