RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 TRIM40Q6P9F5 258 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 BTBD10Q9BSF8 475 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 MSL3P1P0C860 447 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 ZNF286BP0CG31 522 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 FCGRTP55899 365 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 CYP2A13Q16696 494 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 MPPE1Q53F39 396 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 FAM91A1Q658Y4 838 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 PIGBQ92521 554 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 PSME2Q9UL46 239 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 CTTNBP2Q8WZ74 1663 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 CASKO14936 926 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 SERPINF2P08697 491 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 MAGEA12P43365 314 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 DNASE1L1P49184 302 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 FAPQ12884 760 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 SCARF1Q14162 830 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 CDC42EP4Q9H3Q1 356 aaKnown RBP16.59■□□□□ 0.25
PTCH1-201ENST00000331920 RMI1Q9H9A7 625 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 LRATO95237 230 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 ADIGQ0VDE8 80 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 ANGEL2Q5VTE6 544 aaKnown RBP16.59■□□□□ 0.25
PTCH1-201ENST00000331920 TCAIMQ8N3R3 496 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 MYCBPAPQ8TBZ2 947 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 SELENOMQ8WWX9 145 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 NECTIN3Q9NQS3 549 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 RRN3Q9NYV6 651 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 MDM4O15151 490 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 SGTAO43765 313 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 SLC28A2O43868 658 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 PQBP1O60828 265 aaKnown RBP16.59■□□□□ 0.25
PTCH1-201ENST00000331920 VIL1P09327 827 aaKnown RBP16.59■□□□□ 0.25
PTCH1-201ENST00000331920 CYP2A6P11509 494 aaPredicted RBP16.59■□□□□ 0.25
PTCH1-201ENST00000331920 TKTL1P51854 596 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 KIAA1324Q6UXG2 1013 aaKnown RBP16.59■□□□□ 0.25
PTCH1-201ENST00000331920 TTC29Q8NA56 475 aaPredicted RBP16.59■□□□□ 0.25
PTCH1-201ENST00000331920 DNAJB14Q8TBM8 379 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 CATSPERZQ9NTU4 200 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 MAPRE3Q9UPY8 281 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 PROCP04070 461 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 ACAT1P24752 427 aaKnown RBP16.59■□□□□ 0.25
PTCH1-201ENST00000331920 SREBF2Q12772 1141 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 PAGE2BQ5JRK9 111 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 SATL1Q86VE3 508 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 MYDGFQ969H8 173 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 PHF20Q9BVI0 1012 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 RUSC1Q9BVN2 902 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 GANQ9H2C0 597 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 GPN1Q9HCN4 374 aaPredicted RBP16.59■□□□□ 0.25
PTCH1-201ENST00000331920 IFT46Q9NQC8 304 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 HEG1Q9ULI3 1381 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 TBC1D3BA6NDS4 549 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 CRY2Q49AN0 593 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 TCEAL6Q6IPX3 200 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 LNX2Q8N448 690 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 FNDC11Q9BVV2 318 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 PABPC3Q9H361 631 aaKnown RBP16.59■□□□□ 0.25
PTCH1-201ENST00000331920 EQTNQ9NQ60 294 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 ZNF780BQ9Y6R6 833 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 RAMP2O60895 175 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 SIN3BO75182 1162 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 BCL2L1Q07817 233 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 AMIGO1Q86WK6 493 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 PIH1D2Q8WWB5 315 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 ZNF285Q96NJ3 590 aa16.59■□□□□ 0.25
PTCH1-201ENST00000331920 A0A0G2JLW4 131 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 ZSCAN5BA6NJL1 495 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 NR1I3Q14994 352 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 PTCHD4Q6ZW05 846 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 SNX32Q86XE0 403 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 PCDH20Q8N6Y1 951 aaKnown RBP16.58■□□□□ 0.25
PTCH1-201ENST00000331920 GAL3ST1Q99999 423 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 MORF4L1Q9UBU8 362 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 BAIAP2Q9UQB8 552 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 A0A087WXM4 84 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 TUBP50607 506 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 SLC34A1Q06495 639 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 AKAP14Q86UN6 197 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 AMER2Q8N7J2 671 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 TOP1MTQ969P6 601 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 ZC3H10Q96K80 434 aaKnown RBP16.58■□□□□ 0.25
PTCH1-201ENST00000331920 OSBPL11Q9BXB4 747 aa16.58■□□□□ 0.25
PTCH1-201ENST00000331920 ALDH2P05091 517 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 ANXA5P08758 320 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 CAPGP40121 348 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 MCEMP1Q8IX19 187 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 CLHC1Q8NHS4 586 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 FAM81AQ8TBF8 368 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 ZHX1-C8orf76Q96EF9 292 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 GFM1Q96RP9 751 aaKnown RBP16.58■□□□□ 0.24
PTCH1-201ENST00000331920 SPATA9Q9BWV2 254 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 INTS10Q9NVR2 710 aaKnown RBP16.58■□□□□ 0.24
PTCH1-201ENST00000331920 MAST1Q9Y2H9 1570 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 TMEM253P0C7T8 217 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 VPS72Q15906 364 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 HSDL1Q3SXM5 330 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 C12orf56Q8IXR9 622 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 OR10H5Q8NGA6 315 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 RXFP2Q8WXD0 754 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 TBL1YQ9BQ87 522 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms