RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 WDR5BQ86VZ2 330 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 ARMC8Q8IUR7 673 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 SLC44A5Q8NCS7 719 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 PPHLN1Q8NEY8 458 aaKnown RBP4.78□□□□□ -1.64
CCDC54-201ENST00000261058 NFKBIDQ8NI38 313 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 TMEM170AQ8WVE7 144 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 CUL5Q93034 780 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 EME1Q96AY2 570 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 LBHD1Q9BQE6 289 aaPredicted RBP4.78□□□□□ -1.64
CCDC54-201ENST00000261058 IFT27Q9BW83 186 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 TTYH1Q9H313 450 aaPredicted RBP4.78□□□□□ -1.64
CCDC54-201ENST00000261058 ARHGAP26Q9UNA1 814 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.78□□□□□ -1.64
CCDC54-201ENST00000261058 TARSL2A2RTX5 802 aaKnown RBP4.77□□□□□ -1.65
CCDC54-201ENST00000261058 KCNU1A8MYU2 1149 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 F5H0A9 414 aaPredicted RBP4.77□□□□□ -1.65
CCDC54-201ENST00000261058 TNPO2O14787 897 aaKnown RBP4.77□□□□□ -1.65
CCDC54-201ENST00000261058 TNFSF14O43557 240 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 TBX18O95935 607 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 UNGP13051 313 aaPredicted RBP4.77□□□□□ -1.65
CCDC54-201ENST00000261058 TNFAIP3P21580 790 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 EPHA8P29322 1005 aaPredicted RBP4.77□□□□□ -1.65
CCDC54-201ENST00000261058 SLC16A2P36021 539 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 SKIV2L2P42285 1042 aaKnown RBP4.77□□□□□ -1.65
CCDC54-201ENST00000261058 CDH15P55291 814 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 PMPCAQ10713 525 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 SMTNL2Q2TAL5 461 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 ZNF667Q5HYK9 610 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 TMEM268Q5VZI3 342 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 ZNF626Q68DY1 528 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 SLC2A7Q6PXP3 512 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 ZNF793Q6ZN11 406 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 C1orf122Q6ZSJ8 110 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 IGFN1Q86VF2 1251 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 CPXM2Q8N436 756 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 SLC25A41Q8N5S1 370 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 PLD5Q8N7P1 536 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 KDM1BQ8NB78 822 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 OR4N2Q8NGD1 307 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 HSPH1Q92598 858 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 SKA1Q96BD8 255 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 ZFYVE19Q96K21 471 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 C7orf26Q96N11 449 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 NR1H4Q96RI1 486 aaPredicted RBP4.77□□□□□ -1.65
CCDC54-201ENST00000261058 CXorf56Q9H5V9 222 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 PNRC2Q9NPJ4 139 aaKnown RBP4.77□□□□□ -1.65
CCDC54-201ENST00000261058 MSRB1Q9NZV6 116 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 DHDHQ9UQ10 334 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 NAALADL1Q9UQQ1 740 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 CNPY2Q9Y2B0 182 aa4.77□□□□□ -1.65
CCDC54-201ENST00000261058 CBY3A6NI87 242 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 ADAM10O14672 748 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 RNMTO43148 476 aaKnown RBP4.76□□□□□ -1.65
CCDC54-201ENST00000261058 PPFIA2O75334 1257 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 TOP3BO95985 862 aaKnown RBP4.76□□□□□ -1.65
CCDC54-201ENST00000261058 CD72P21854 359 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 KLRC2P26717 231 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 TDGQ13569 410 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 ALG10Q5BKT4 473 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 ALG10BQ5I7T1 473 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 ENTPD8Q5MY95 495 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 DSTYKQ6XUX3 929 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 PRSS45Q7RTY3 260 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 CCDC25Q86WR0 208 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 ANKRD13BQ86YJ7 626 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 CNGA4Q8IV77 575 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 ZDHHC23Q8IYP9 409 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 TMTC2Q8N394 836 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 C16orf52Q8NHV5 167 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 PCDHA12Q9UN75 941 aa4.76□□□□□ -1.65
CCDC54-201ENST00000261058 SETD1BQ9UPS6 1966 aaKnown RBP4.76□□□□□ -1.65
CCDC54-201ENST00000261058 COL3A1P02461 1466 aaPredicted RBP4.76□□□□□ -1.65
CCDC54-201ENST00000261058 PABPN1LA6NDY0 278 aaKnown RBP4.75□□□□□ -1.65
CCDC54-201ENST00000261058 TAF4O00268 1085 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 SPTLC2O15270 562 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 CEP104O60308 925 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 TMCC1O94876 653 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 FGF2P09038 288 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 CIITAP33076 1130 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 ARL1P40616 181 aaPredicted RBP4.75□□□□□ -1.65
CCDC54-201ENST00000261058 CENPAP49450 140 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 CLCNKBP51801 687 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 EFNB1P98172 346 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 SLC18A2Q05940 514 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 MTX1Q13505 466 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 EZH2Q15910 746 aaKnown RBP4.75□□□□□ -1.65
CCDC54-201ENST00000261058 ME3Q16798 604 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 SLC22A25Q6T423 547 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 CLEC4GQ6UXB4 293 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 MAATS1Q7Z4T9 603 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 ZMIZ2Q8NF64 920 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 MPLKIPQ8TAP9 179 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 NRIP3Q9NQ35 241 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 ENTPD7Q9NQZ7 604 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 HSPB7Q9UBY9 170 aa4.75□□□□□ -1.65
CCDC54-201ENST00000261058 ADGRF5Q8IZF2 1346 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 A0A087X0M5 115 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 A0A1B0GX30 115 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 A6NNC1 897 aa4.74□□□□□ -1.65
CCDC54-201ENST00000261058 FAM157AC9JC47 383 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms