RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 HS3ST3A1Q9Y663 406 aa8.18□□□□□ -1.1
PPP4R1-211ENST00000578875 USP3Q9Y6I4 520 aa8.18□□□□□ -1.1
PPP4R1-211ENST00000578875 AKAP9Q99996 3911 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 A6NNZ2 444 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 LMO7DNF2Z398 122 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 H3BM21 787 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 SLC7A4O43246 635 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 MSI1O43347 362 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 BNIP3LO60238 219 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 RAD1O60671 282 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 DNAJB5O75953 348 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 PCDH8O95206 1070 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 ASLP04424 464 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 SRPRAP08240 638 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 FAM200BP0CF97 657 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 DLATP10515 647 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 GARTP22102 1010 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 SCP2P22307 547 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 F8A1P23610 371 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 ECT2LQ008S8 904 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 SEPT6Q14141 434 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 ELAVL3Q14576 367 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 TMEM164Q5U3C3 297 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 NADSYN1Q6IA69 706 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 ESRP1Q6NXG1 681 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 CCDC186Q7Z3E2 898 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 TADA2BQ86TJ2 420 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 PARGQ86W56 976 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 SLITRK4Q8IW52 837 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 MFN1Q8IWA4 741 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 GPD1LQ8N335 351 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 FAM174AQ8TBP5 190 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 GPBAR1Q8TDU6 330 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 GLMNQ92990 594 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 PLD4Q96BZ4 506 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 C5orf34Q96MH7 638 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 TWNKQ96RR1 684 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 LRRC61Q9BV99 259 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 MFRPQ9BY79 579 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 GPN2Q9H9Y4 310 aaPredicted RBP8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 RRN3Q9NYV6 651 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 SPASTQ9UBP0 616 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 STOML2Q9UJZ1 356 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 SLC5A6Q9Y289 635 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 CEP83Q9Y592 693 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 PCDHA5Q9Y5H7 936 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 ITIH6Q6UXX5 1313 aa8.17□□□□□ -1.1
PPP4R1-211ENST00000578875 ZNF233A6NK53 670 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 BHMG1C9JSJ3 638 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 MKRN2OSH3BPM6 223 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 B4GAT1O43505 415 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 TBCAO75347 108 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 SORBS2O94875 1100 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 CBX6O95503 412 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 NADKO95544 446 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 CTSLP07711 333 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 SNRPB2P08579 225 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 TNNI1P19237 187 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 PSEN1P49768 467 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 KRTAP10-9P60411 292 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 YWHAGP61981 247 aaKnown RBP eCLIP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 BECN1Q14457 450 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 NR6A1Q15406 480 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 BMT2Q1RMZ1 405 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 KMT5BQ4FZB7 885 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 FAM133BQ5BKY9 247 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 EFHC2Q5JST6 749 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 L1TD1Q5T7N2 865 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 SPNS3Q6ZMD2 512 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 DCP2Q8IU60 420 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 CCNJLQ8IV13 435 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 SYCP3Q8IZU3 236 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 KDM1BQ8NB78 822 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 EDEM1Q92611 657 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 PCSK5Q92824 1860 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 ART4Q93070 314 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 CCDC127Q96BQ5 260 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 CYFIP2Q96F07 1278 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 CDK5RAP3Q96JB5 506 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 TNIP3Q96KP6 325 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 PRICKLE1Q96MT3 831 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 ACCSQ96QU6 501 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 TAAR9Q96RI9 348 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 RANBP9Q96S59 729 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 KLF6Q99612 283 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 MDFIQ99750 246 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 SLC17A9Q9BYT1 436 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 SPRY4Q9C004 299 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 MRPL44Q9H9J2 332 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 CYP4F12Q9HCS2 524 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 MAP10Q9P2G4 905 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 APOBEC3BQ9UH17 382 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 STRIP2Q9ULQ0 834 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 PRRC2CQ9Y520 2896 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 PCDHB13Q9Y5F0 798 aa8.16□□□□□ -1.1
PPP4R1-211ENST00000578875 C4BPAP04003 597 aaKnown RBP8.15□□□□□ -1.1
PPP4R1-211ENST00000578875 TCN2P20062 427 aa8.15□□□□□ -1.1
PPP4R1-211ENST00000578875 TRPC3Q13507 836 aa8.15□□□□□ -1.1
PPP4R1-211ENST00000578875 ACCSLQ4AC99 568 aa8.15□□□□□ -1.1
PPP4R1-211ENST00000578875 TMEM259Q4ZIN3 620 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 1104.6 ms