RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 SHISA4Q96DD7 197 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 SIPA1Q96FS4 1042 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 TSPAN17Q96FV3 270 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 ERO1AQ96HE7 468 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 MAGED4Q96JG8 741 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 TMEM68Q96MH6 324 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 KCNC2Q96PR1 638 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 PRAM1Q96QH2 718 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 STK33Q9BYT3 514 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 PUS3Q9BZE2 481 aaKnown RBP4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 WNT10AQ9GZT5 417 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 HDHD2Q9H0R4 259 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 NOL6Q9H6R4 1146 aaKnown RBP4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 OBP2BQ9NPH6 170 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 CCM2LQ9NUG4 571 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 FBXO28Q9NVF7 368 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 TMEM160Q9NX00 188 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 SELENONQ9NZV5 590 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 MARCH4Q9P2E8 410 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 LARSQ9P2J5 1176 aaKnown RBP4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 UXTQ9UBK9 157 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 TNFRSF10DQ9UBN6 386 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 B4GALT6Q9UBX8 382 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 CYTH4Q9UIA0 394 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 CNOT11Q9UKZ1 510 aaKnown RBP4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 ZNF215Q9UL58 517 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 TBX20Q9UMR3 447 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 TNFSF13BQ9Y275 285 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 SH3GLB1Q9Y371 365 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 PCDHA11Q9Y5I1 949 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 LYVE1Q9Y5Y7 322 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 SPATA31A3Q5VYP0 1347 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 SALL3Q9BXA9 1300 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 IRS2Q9Y4H2 1338 aa4.62□□□□□ -1.67
HMGB3P26-201ENST00000560051 HTR3EA5X5Y0 456 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 AGAP14A8MT82 685 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 FADS2P1A8MWK0 482 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 RASGRF2O14827 1237 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 VILLO15195 856 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 TGM5O43548 720 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 FKTNO75072 461 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 CRCPO75575 148 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 GJB3O75712 270 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 IDH1O75874 414 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 RHOBTB1O94844 696 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ALPPP05187 535 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 KRT8P05787 483 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 PNMA6AP0CW24 399 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ALPPL2P10696 532 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ATF6P18850 670 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 CASTP20810 708 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 CPN2P22792 545 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 PCSK1P29120 753 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 CCND2P30279 289 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 LRPAP1P30533 357 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 MAT2AP31153 395 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ACSL1P33121 698 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 TRHRP34981 398 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 SPAM1P38567 509 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 CAPGP40121 348 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 DPP6P42658 865 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 MAGEA1P43355 309 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ME1P48163 572 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 CAMLGP49069 296 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ACADVLP49748 655 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 CPT1AP50416 773 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 HERVK_113P62684 666 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 CREMQ03060 361 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 PPATQ06203 517 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 GOLGA8FQ08AF8 430 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 GOLGA8DPQ0D2H9 430 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 SCRN3Q0VDG4 424 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ABRQ12979 859 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 NPRL3Q12980 569 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 IL24Q13007 206 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 FADDQ13158 208 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 VEPH1Q14D04 833 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 KARSQ15046 597 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 RPS6KA2Q15349 733 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 TARBP2Q15633 366 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 SF1Q15637 639 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 TXNRD1Q16881 649 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 TIGD6Q17RP2 521 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 FAM83EQ2M2I3 478 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 MCMDC2Q4G0Z9 681 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 PLEKHS1Q5SXH7 462 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ADGRF1Q5T601 910 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ATXN7L2Q5T6C5 722 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 KLHDC7AQ5VTJ3 777 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 CDCP2Q5VXM1 449 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 SPECC1LQ69YQ0 1117 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 NOTUMQ6P988 496 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 AFTPHQ6ULP2 937 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 TRIM72Q6ZMU5 477 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 MIB1Q86YT6 1006 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 IRF2BP1Q8IU81 584 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 CADM3Q8N126 398 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 LILRA2Q8N149 483 aa4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 ZCCHC7Q8N3Z6 543 aaKnown RBP4.61□□□□□ -1.67
HMGB3P26-201ENST00000560051 SCAIQ8N9R8 606 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms