RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 DNA2P51530 1060 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 ELAVL3Q14576 367 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 CST6Q15828 149 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 CCDC6Q16204 474 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 POM121L1PQ3SYA9 428 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 TTC31Q49AM3 519 aaPredicted RBP16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 ATP13A4Q4VNC1 1196 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 LPCAT2Q7L5N7 544 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 ACRBPQ8NEB7 543 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 OR8D1Q8WZ84 308 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 TOE1Q96GM8 510 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 ZC3H10Q96K80 434 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 CALN1Q9BXU9 219 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 KLC2Q9H0B6 622 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 ARRDC1-AS1Q9H2J1 176 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 PCDH18Q9HCL0 1135 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 ITM2CQ9NQX7 267 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 USP36Q9P275 1121 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 MFHAS1Q9Y4C4 1052 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 HYOU1Q9Y4L1 999 aa16.19■□□□□ 0.18
RABGGTA-206ENST00000558649 DMDP11532 3685 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 SPAG17Q6Q759 2223 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 TNRC6BQ9UPQ9 1833 aaKnown RBP16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 BUB1O43683 1085 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 MTA2O94776 668 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 CD48P09326 243 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 AMPD1P23109 780 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 CD6P30203 668 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 ARHGAP25P42331 645 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 VASPP50552 380 aaPredicted RBP16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 CLCN6P51797 869 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 ZNF135P52742 658 aaPredicted RBP16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 CREB5Q02930 508 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 SPEM2Q0P670 501 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 MMRN1Q13201 1228 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 DPYSQ14117 519 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 PARP15Q460N3 678 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 SLC36A4Q6YBV0 504 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 POLNQ7Z5Q5 900 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 TMEM139Q8IV31 216 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 UMODL1-AS1Q8N2C9 162 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 NPWQ8N729 165 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 KCTD6Q8NC69 237 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 CCDC114Q96M63 670 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 CSPG4P5Q96PW8 444 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 FAM129BQ96TA1 746 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 GPR174Q9BXC1 333 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 PABPC3Q9H361 631 aaKnown RBP16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 DONSONQ9NYP3 566 aa16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 ATXN2Q99700 1313 aaKnown RBP16.18■□□□□ 0.18
RABGGTA-206ENST00000558649 A0A1W2PP55 124 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 GOLGA6L3A6NEY3 463 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 KDELR3O43731 214 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 SPOPO43791 374 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 RNASEH2AO75792 299 aaKnown RBP16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 RETP07949 1114 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 KRT7P08729 469 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 SLC8A1P32418 973 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 PTGER3P43115 390 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 RECQLP46063 649 aaPredicted RBP16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 HCAR3P49019 387 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 GEMIN4P57678 1058 aaKnown RBP16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 YBEYP58557 167 aaPredicted RBP16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 SERINC3Q13530 473 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 TMCO3Q6UWJ1 677 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 DSG4Q86SJ6 1040 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 KIAA1328Q86T90 577 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 METTL3Q86U44 580 aaKnown RBP16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 RYBPQ8N488 228 aaPredicted RBP16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 GRIN3AQ8TCU5 1115 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 OMDQ99983 421 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 DESI2Q9BSY9 194 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 TM6SF2Q9BZW4 377 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 SLC39A8Q9C0K1 460 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 GOLPH3Q9H4A6 298 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 LRRC19Q9H756 370 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 GRPEL1Q9HAV7 217 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 ETNK2Q9NVF9 386 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 SERGEFQ9UGK8 458 aa16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 FARP1Q9Y4F1 1045 aaPredicted RBP16.17■□□□□ 0.18
RABGGTA-206ENST00000558649 RCCD1A6NED2 376 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 ARHGAP42A6NI28 874 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 PLK4O00444 970 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 EPN2O95208 641 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 CD160O95971 181 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 ADH1BP00325 375 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 OXTRP30559 389 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 PAPOLAP51003 745 aaKnown RBP16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 NDST2P52849 883 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 METAP1P53582 386 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 NAP1L1P55209 391 aaKnown RBP16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 ZBTB16Q05516 673 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 SLC20A2Q08357 652 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 DPYSL3Q14195 570 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 LYSMD4Q5XG99 296 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 CYP2U1Q7Z449 544 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 CHST14Q8NCH0 376 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 OR2A12Q8NGT7 310 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 OR6K2Q8NGY2 324 aa16.16■□□□□ 0.18
RABGGTA-206ENST00000558649 HSPA12BQ96MM6 686 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms