RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 C5orf22Q49AR2 442 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 SLC9B1Q4ZJI4 515 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 SLC45A4Q5BKX6 768 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 MEX3CQ5U5Q3 659 aaKnown RBP5.57□□□□□ -1.52
SYNE2-210ENST00000553455 C4orf50Q6ZRC1 276 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 DIS3L2Q8IYB7 885 aaKnown RBP5.57□□□□□ -1.52
SYNE2-210ENST00000553455 SLC16A11Q8NCK7 471 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 WIPF2Q8TF74 440 aaPredicted RBP5.57□□□□□ -1.52
SYNE2-210ENST00000553455 HASPINQ8TF76 798 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 HSPH1Q92598 858 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 BARD1Q99728 777 aaKnown RBP5.57□□□□□ -1.52
SYNE2-210ENST00000553455 PIMREGQ9BSJ6 248 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.57□□□□□ -1.52
SYNE2-210ENST00000553455 CXorf56Q9H5V9 222 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 BRF2Q9HAW0 419 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 ZNF304Q9HCX3 659 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 TBC1D14Q9P2M4 693 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 PEMTQ9UBM1 199 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 HSPB7Q9UBY9 170 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 CLDN16Q9Y5I7 305 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 SCINQ9Y6U3 715 aa5.57□□□□□ -1.52
SYNE2-210ENST00000553455 TARSL2A2RTX5 802 aaKnown RBP5.56□□□□□ -1.52
SYNE2-210ENST00000553455 PI4KAP2A4QPH2 592 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 PABPN1LA6NDY0 278 aaKnown RBP5.56□□□□□ -1.52
SYNE2-210ENST00000553455 TMEM247A6NEH6 219 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 TGFB1I1O43294 461 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 LDHCP07864 332 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 COX7A2P14406 83 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 CHMP24386 653 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 POLD2P49005 469 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 EFNA5P52803 228 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 HSF1Q00613 529 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 GALNT3Q14435 633 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 ZNF268Q14587 947 aaPredicted RBP5.56□□□□□ -1.52
SYNE2-210ENST00000553455 EARS2Q5JPH6 523 aaKnown RBP5.56□□□□□ -1.52
SYNE2-210ENST00000553455 SNX30Q5VWJ9 437 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 TBC1D9BQ66K14 1250 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 FBXO42Q6P3S6 717 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 TMEM81Q6P7N7 255 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 ATF7IPQ6VMQ6 1270 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 B4GALNT4Q76KP1 1039 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 CPXM2Q8N436 756 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 DPF1Q92782 380 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 KIF1BPQ96EK5 621 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 PLEKHA5Q9HAU0 1116 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 PDGFCQ9NRA1 345 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 ATP8A2Q9NTI2 1148 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 ZNHIT2Q9UHR6 403 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 SLC8A2Q9UPR5 921 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 PIAS3Q9Y6X2 628 aa5.56□□□□□ -1.52
SYNE2-210ENST00000553455 CBX6O95503 412 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 NFATC1O95644 943 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 SERPINC1P01008 464 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 ABCD1P33897 745 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 CYP2J2P51589 502 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 SLC12A2P55011 1212 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 ELLP55199 621 aaPredicted RBP5.55□□□□□ -1.52
SYNE2-210ENST00000553455 NHLH1Q02575 133 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 LRIG3Q6UXM1 1119 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 GHDCQ8N2G8 530 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 BCAS4Q8TDM0 211 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 HDAC7Q8WUI4 952 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 TEFMQ96QE5 360 aaKnown RBP5.55□□□□□ -1.52
SYNE2-210ENST00000553455 PCDHB16Q9NRJ7 776 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 GRHL1Q9NZI5 618 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 MPP6Q9NZW5 540 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 KLHL13Q9P2N7 655 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 FBXO2Q9UK22 296 aaPredicted RBP5.55□□□□□ -1.52
SYNE2-210ENST00000553455 DHDHQ9UQ10 334 aa5.55□□□□□ -1.52
SYNE2-210ENST00000553455 WDR17Q8IZU2 1322 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 TEX13CA0A0J9YWL9 993 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 USP12O75317 370 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 PRKCGP05129 697 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 CHRNA5P30532 468 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 MAPK4P31152 587 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 ICAM3P32942 547 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 SKIV2L2P42285 1042 aaKnown RBP5.54□□□□□ -1.52
SYNE2-210ENST00000553455 TGFB2P61812 414 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 PKP1Q13835 747 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 ME3Q16798 604 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 PAPD7Q5XG87 772 aaKnown RBP5.54□□□□□ -1.52
SYNE2-210ENST00000553455 CFAP161Q6P656 301 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 PXKQ7Z7A4 578 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 TRIM74Q86UV6 250 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 TRIM73Q86UV7 250 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 CNTROBQ8N137 903 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 NGEFQ8N5V2 710 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 ZMIZ2Q8NF64 920 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 CREB3L4Q8TEY5 395 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 FAR1Q8WVX9 515 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 KLHL15Q96M94 604 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 TREX2Q9BQ50 279 aaPredicted RBP5.54□□□□□ -1.52
SYNE2-210ENST00000553455 IFT27Q9BW83 186 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 SCNM1Q9BWG6 230 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 HEMGNQ9BXL5 484 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 HIPK3Q9H422 1215 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 KRT84Q9NSB2 600 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 IL1RAPL1Q9NZN1 696 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 FBXO40Q9UH90 709 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 IPO11Q9UI26 975 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms