RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 CTNND2Q9UQB3 1225 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 NCKAP1Q9Y2A7 1128 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 COQ4Q9Y3A0 265 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 PCDHB1Q9Y5F3 818 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 BOD1L1Q8NFC6 3051 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 COL12A1Q99715 3063 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 I6L893 689 aaPredicted RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 TLR4O00206 839 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 NPC1O15118 1278 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 VILLO15195 856 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 SLC31A1O15431 190 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 SIGLEC6O43699 453 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 SNAP91O60641 907 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 GADD45BO75293 160 aaPredicted RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 NEBLO76041 1014 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 CNTN5O94779 1100 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 LUC7L3O95232 432 aaKnown RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 CTSLP07711 333 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 ZNF883P0CG24 379 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 SETSIPP0DME0 302 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 CD38P28907 300 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 USP8P40818 1118 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 GPD2P43304 727 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 ACADVLP49748 655 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 RACK1P63244 317 aaKnown RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 ECT2LQ008S8 904 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 CNTN1Q12860 1018 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 NME3Q13232 169 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 HNRNPDQ14103 355 aaKnown RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 NAA30Q147X3 362 aaPredicted RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 DRAP1Q14919 205 aaPredicted RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 SUZ12Q15022 739 aaKnown RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 ARHGAP44Q17R89 818 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 TTC31Q49AM3 519 aaPredicted RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 RAB6CQ53S08 254 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 ZNF658Q5TYW1 1059 aaPredicted RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 OR6B2Q6IFH4 312 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 CRTC1Q6UUV9 634 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 LINGO4Q6UY18 593 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 LEKR1Q6ZMV7 388 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 PHLDB2Q86SQ0 1253 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 CCAR2Q8N163 923 aaKnown RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 WDTC1Q8N5D0 677 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 HJURPQ8NCD3 748 aaPredicted RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 CHST14Q8NCH0 376 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 KCTD13Q8WZ19 329 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 COL26A1Q96A83 441 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 SLC39A13Q96H72 371 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 NT5C1BQ96P26 610 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 MAGEB5Q9BZ81 275 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 INTS2Q9H0H0 1204 aaKnown RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 SIK2Q9H0K1 926 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 RAB6CQ9H0N0 254 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 SGK2Q9HBY8 427 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 UBE2TQ9NPD8 197 aaPredicted RBP7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 CNGB3Q9NQW8 809 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 SUN2Q9UH99 717 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 USP25Q9UHP3 1055 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 PCDHGB2Q9Y5G2 931 aa7.05□□□□□ -1.28
PRPF40B-214ENST00000551320 MAST4O15021 2626 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 A0A1W2PQ27 194 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 A0A1W2PQ64 194 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 EIF4E1BA6NMX2 242 aaKnown RBP7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 BECN2A8MW95 431 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 SCAMP1O15126 338 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 THAP12O43422 761 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 SMAD6O43541 496 aaKnown RBP7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 PCDHGA12O60330 932 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 BRINP1O60477 761 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 TRUB2O95900 331 aaKnown RBP7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 MPOP05164 745 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 GOT1P17174 413 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 SLC9A1P19634 815 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 RRM1P23921 792 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 EPHA8P29322 1005 aaPredicted RBP7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 GKP32189 559 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 SERPINB4P48594 390 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 ZNF132P52740 706 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 NXPH1P58417 271 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 TAS2R38P59533 333 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 RNASE9P60153 205 aaKnown RBP7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 FKBP3Q00688 224 aaKnown RBP7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 CNGA2Q16280 664 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 HSP90AA4PQ58FG1 418 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 LRRC73Q5JTD7 316 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 TPRG1LQ5T0D9 272 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 RNF219Q5W0B1 726 aaPredicted RBP7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 SEL1L3Q68CR1 1132 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 ATL3Q6DD88 541 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 CXorf57Q6NSI4 855 aaKnown RBP7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 FBXL22Q6P050 247 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 PCSK4Q6UW60 755 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 KANSL1Q7Z3B3 1105 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 DEFB106AQ8N104 65 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 SLC25A45Q8N413 288 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 ENGASEQ8NFI3 743 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 OR2T34Q8NGX1 318 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 GRIN3AQ8TCU5 1115 aa7.04□□□□□ -1.28
PRPF40B-214ENST00000551320 FRS2Q8WU20 508 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms