RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 ANKRD36A6QL64 1941 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 A0A1W2PQU0 124 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 RNGTTO60942 597 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 CLDN11O75508 207 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 RFPL3O75679 317 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 FGFR1OPO95684 399 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 JUPP14923 745 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 ZNF18P17022 549 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 KRT9P35527 623 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 FLT3P36888 993 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 MTIF2P46199 727 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 SULT1E1P49888 294 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 CDH4P55283 916 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 CLDN2P57739 230 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 SEMG2Q02383 582 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 PTK2Q05397 1052 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 TAF3Q5VWG9 929 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 KDM7AQ6ZMT4 941 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 TMPRSS12Q86WS5 348 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 TRIM69Q86WT6 500 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 FAM71AQ8IYT1 594 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 TMEM145Q8NBT3 493 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 ZNF397Q8NF99 534 aaPredicted RBP11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 MUC3BQ9H195 1237 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 TNKS2Q9H2K2 1166 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 ERVMER34-1Q9H9K5 563 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 SCUBE2Q9NQ36 999 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 ZNF212Q9UDV6 495 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 HS3ST2Q9Y278 367 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 PCDHGA1Q9Y5H4 931 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 FHOD1Q9Y613 1164 aa11.84□□□□□ -0.51
PRPF40B-212ENST00000551111 A0A087WV48 116 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 GTPBP10A4D1E9 387 aaKnown RBP11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 DRGXA6NNA5 263 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 KPNA3O00505 521 aaPredicted RBP11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 SLC7A4O43246 635 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 SIGLEC6O43699 453 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 RHOCP08134 193 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 GIMD1P0DJR0 217 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 ATXN8OSP0DMR3 200 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 CHRNA3P32297 505 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 ARRB1P49407 418 aaPredicted RBP11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 FGL2Q14314 439 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 STAT4Q14765 748 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 DRAP1Q14919 205 aaPredicted RBP11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 ZNF284Q2VY69 593 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 PROX2Q3B8N5 592 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 INAVAQ3KP66 663 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 ZNF542PQ5EBM4 170 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 ARSIQ5FYB1 569 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 FAM46CQ5VWP2 391 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 SEL1L3Q68CR1 1132 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 PHLDB2Q86SQ0 1253 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 NOP9Q86U38 636 aaKnown RBP11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 XYLT1Q86Y38 959 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 ATP11CQ8NB49 1132 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 OR13H1Q8NG92 308 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 GRIN3AQ8TCU5 1115 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 VOPP1Q96AW1 172 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 SKA1Q96BD8 255 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 KDM4CQ9H3R0 1056 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 WDCPQ9H6R7 721 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 RAI2Q9Y5P3 530 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 ATMQ13315 3056 aa11.83□□□□□ -0.52
PRPF40B-212ENST00000551111 E9PAM4 449 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 C1QTNF3-AMACRE9PGA6 284 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 GOLGA8SH3BPF8 625 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 ALOX15BO15296 676 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 RAD51BO15315 384 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 SRGAP2O75044 1071 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 ZMPSTE24O75844 475 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 GJB6O95452 261 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 CD160O95971 181 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 PRB1P04280 392 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 THEGLP0DJG4 465 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 CYP11B1P15538 503 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 GKP32189 559 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 CDH5P33151 784 aaPredicted RBP11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 EIF2S3P41091 472 aaKnown RBP11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 GABRB2P47870 512 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 OXCT1P55809 520 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 INSM1Q01101 510 aaPredicted RBP11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 DEUP1Q05D60 604 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 ACAP1Q15027 740 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 MAN2A1Q16706 1144 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 DPCR1Q3MIW9 517 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 FAM102AQ5T9C2 384 aaPredicted RBP11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 DPY19L3Q6ZPD9 716 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 DSG4Q86SJ6 1040 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 SLC22A18ASQ8N1D0 253 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 CPA5Q8WXQ8 436 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 KLHDC7BQ96G42 594 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 BMFQ96LC9 184 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 CFAP57Q96MR6 1250 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 NDST4Q9H3R1 872 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 SYNCQ9H7C4 482 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 NDFIP2Q9NV92 336 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 DMTF1Q9Y222 760 aa11.82□□□□□ -0.52
PRPF40B-212ENST00000551111 WASF2Q9Y6W5 498 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms