RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 ITGAVP06756 1048 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 DESP17661 470 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 CHRNB2P17787 502 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 ADRA1BP35368 520 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 PTPN9P43378 593 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 KLK7P49862 253 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 GEMIN4P57678 1058 aaKnown RBP9.58□□□□□ -0.88
YBX3-218ENST00000546298 NRG1Q02297 640 aaPredicted RBP9.58□□□□□ -0.88
YBX3-218ENST00000546298 GNA12Q03113 381 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 CNTN1Q12860 1018 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 STAT4Q14765 748 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 SETMARQ53H47 684 aaPredicted RBP9.58□□□□□ -0.88
YBX3-218ENST00000546298 CCDC183Q5T5S1 534 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 NEK5Q6P3R8 708 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 LAYNQ6UX15 382 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 STRADAQ7RTN6 431 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 TRIM69Q86WT6 500 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 EMC1Q8N766 993 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 MFSD2AQ8NA29 543 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 SLC30A5Q8TAD4 765 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 BAHD1Q8TBE0 780 aaPredicted RBP9.58□□□□□ -0.88
YBX3-218ENST00000546298 RXFP2Q8WXD0 754 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 ERGIC2Q96RQ1 377 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 SELENOOQ9BVL4 669 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 TMEM121BQ9BXQ6 578 aaPredicted RBP9.58□□□□□ -0.88
YBX3-218ENST00000546298 CEP44Q9C0F1 390 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 OSBPL2Q9H1P3 480 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 EBF2Q9HAK2 575 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 ATP13A1Q9HD20 1204 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 ADAM22Q9P0K1 906 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 OR12D3Q9UGF7 316 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 SARDHQ9UL12 918 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 SNX10Q9Y5X0 201 aa9.58□□□□□ -0.88
YBX3-218ENST00000546298 FAM170AA1A519 330 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 PCNX2A6NKB5 2137 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 C2CD4BA6NLJ0 364 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 PRAMEF26H0Y7S4 382 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 K7ERQ8 282 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 PLK4O00444 970 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 KPNA3O00505 521 aaPredicted RBP9.57□□□□□ -0.88
YBX3-218ENST00000546298 EPHB6O15197 1021 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 WNT1P04628 370 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 CDK4P11802 303 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 UNGP13051 313 aaPredicted RBP9.57□□□□□ -0.88
YBX3-218ENST00000546298 FERP16591 822 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 RHOQP17081 205 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 RRM1P23921 792 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 PI4KAP42356 2102 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 MAPKAPK2P49137 400 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 GSCP56915 257 aaPredicted RBP9.57□□□□□ -0.88
YBX3-218ENST00000546298 NXPH1P58417 271 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 PPP2CBP62714 309 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 PPP2CAP67775 309 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 CDO1Q16878 200 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 POM121L1PQ3SYA9 428 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 CCDC14Q49A88 953 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 KCNT1Q5JUK3 1230 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 AGBL4Q5VU57 503 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 TRNP1Q6NT89 227 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 RWDD4Q6NW29 188 aaKnown RBP9.57□□□□□ -0.88
YBX3-218ENST00000546298 PPP1R2P3Q6NXS1 205 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 C22orf39Q6P5X5 142 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 SLCO6A1Q86UG4 719 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 PHF13Q86YI8 300 aaPredicted RBP9.57□□□□□ -0.88
YBX3-218ENST00000546298 DRC7Q8IY82 874 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 GALNT15Q8N3T1 639 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 PCDH20Q8N6Y1 951 aaKnown RBP9.57□□□□□ -0.88
YBX3-218ENST00000546298 PNPLA1Q8N8W4 532 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 OR7D4Q8NG98 312 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 OR2A12Q8NGT7 310 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 ZCCHC14Q8WYQ9 949 aaKnown RBP9.57□□□□□ -0.88
YBX3-218ENST00000546298 PCDHB18PQ96TA0 734 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 HEPHQ9BQS7 1158 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 ERVMER34-1Q9H9K5 563 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 TMPRSS4Q9NRS4 437 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 SEPT11Q9NVA2 429 aaKnown RBP9.57□□□□□ -0.88
YBX3-218ENST00000546298 FTSJ1Q9UET6 329 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 ZMIZ1Q9ULJ6 1067 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 HPCAL4Q9UM19 191 aa9.57□□□□□ -0.88
YBX3-218ENST00000546298 CKAP5Q14008 2032 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 PCDH15Q96QU1 1955 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 SIGLEC16A6NMB1 481 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 SMTNL1A8MU46 457 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 SMAD6O43541 496 aaKnown RBP9.56□□□□□ -0.88
YBX3-218ENST00000546298 ZMPSTE24O75844 475 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 PLEKP08567 350 aaPredicted RBP9.56□□□□□ -0.88
YBX3-218ENST00000546298 ATXN1LP0C7T5 689 aaKnown RBP9.56□□□□□ -0.88
YBX3-218ENST00000546298 GPD1P21695 349 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 MAT2AP31153 395 aaKnown RBP9.56□□□□□ -0.88
YBX3-218ENST00000546298 RFC1P35251 1148 aaPredicted RBP9.56□□□□□ -0.88
YBX3-218ENST00000546298 RXRGP48443 463 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 SERPINH1P50454 418 aaKnown RBP9.56□□□□□ -0.88
YBX3-218ENST00000546298 DNA2P51530 1060 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 METAP1P53582 386 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 CLEC16AQ2KHT3 1053 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 C15orf59Q2T9L4 293 aaPredicted RBP9.56□□□□□ -0.88
YBX3-218ENST00000546298 CARD16Q5EG05 197 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 PRAMEF14Q5SWL7 426 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 LINGO4Q6UY18 593 aa9.56□□□□□ -0.88
YBX3-218ENST00000546298 CCNI2Q6ZMN8 369 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms