RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 GRIK1P39086 918 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 CD97P48960 835 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 GLUD2P49448 558 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 ACTR3P61158 418 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 IRX4P78413 519 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 CDK16Q00536 496 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 MAP3K21Q5TCX8 1036 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 LGSNQ5TDP6 509 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 SDHAF4Q5VUM1 108 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 ZNF280BQ86YH2 543 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 USP33Q8TEY7 942 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 SLC35B4Q969S0 331 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 SRPK1Q96SB4 655 aaKnown RBP11.79□□□□□ -0.52
USP35-207ENST00000530546 MECRQ9BV79 373 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 RMI1Q9H9A7 625 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 SYBUQ9NX95 663 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 UBP1Q9NZI7 540 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 KANSL3Q9P2N6 904 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 PRG3Q9Y2Y8 225 aaPredicted RBP11.79□□□□□ -0.52
USP35-207ENST00000530546 LRIG2O94898 1065 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 TGDSO95455 350 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 SERPINB8P50452 374 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 CLCN2P51788 898 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 TSPY1Q01534 308 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 DCTN2Q13561 401 aaKnown RBP11.78□□□□□ -0.52
USP35-207ENST00000530546 HSP90AA5PQ58FG0 334 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 AAGABQ6PD74 315 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 PDZD4Q76G19 769 aaPredicted RBP11.78□□□□□ -0.52
USP35-207ENST00000530546 SATL1Q86VE3 508 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 THEM5Q8N1Q8 247 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 OR52K1Q8NGK4 314 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 DQX1Q8TE96 717 aaKnown RBP11.78□□□□□ -0.52
USP35-207ENST00000530546 NTAN1Q96AB6 310 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 FAM161BQ96MY7 647 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 SLC9A7Q96T83 725 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 EBF3Q9H4W6 596 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 SFMBT1Q9UHJ3 866 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 ZNF638Q14966 1978 aaKnown RBP11.78□□□□□ -0.52
USP35-207ENST00000530546 hCG_2014768A0A024R1R8 64 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 CCDC195A0A1B0GUA6 201 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 ZBTB24O43167 697 aaPredicted RBP11.78□□□□□ -0.52
USP35-207ENST00000530546 MSI1O43347 362 aaKnown RBP11.78□□□□□ -0.52
USP35-207ENST00000530546 ZNF189O75820 626 aaPredicted RBP11.78□□□□□ -0.52
USP35-207ENST00000530546 KRT38O76015 456 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 UQCRBP14927 111 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 PTPN3P26045 913 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 GRIA2P42262 883 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 PGFP49763 221 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 ARFIP2P53365 341 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 ZBTB16Q05516 673 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 SLC18A2Q05940 514 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 ADRM1Q16186 407 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 CCSAPQ6IQ19 270 aaPredicted RBP11.78□□□□□ -0.52
USP35-207ENST00000530546 FAM171BQ6P995 826 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 SPATA2LQ8IUW3 424 aaPredicted RBP11.78□□□□□ -0.52
USP35-207ENST00000530546 YIPF2Q9BWQ6 316 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 CLIC5Q9NZA1 410 aa11.78□□□□□ -0.52
USP35-207ENST00000530546 FAM159BA6NKW6 160 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 C9IYK1 514 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 BUD23O43709 281 aaKnown RBP11.77□□□□□ -0.52
USP35-207ENST00000530546 OR1G1P47890 313 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 PSMD7P51665 324 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 ACLYP53396 1101 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 LRRC8BQ6P9F7 803 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 SH2D5Q6ZV89 423 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 RASSF3Q86WH2 238 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 SCUBE1Q8IWY4 988 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 NDUFAF2Q8N183 169 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 ZNF276Q8N554 614 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 DNAAF3Q8N9W5 541 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 PCSK9Q8NBP7 692 aaKnown RBP11.77□□□□□ -0.52
USP35-207ENST00000530546 RFWD2Q8NHY2 731 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 OXNAD1Q96HP4 312 aaPredicted RBP11.77□□□□□ -0.52
USP35-207ENST00000530546 CSNK1G1Q9HCP0 422 aa11.77□□□□□ -0.52
USP35-207ENST00000530546 ABI2Q9NYB9 513 aaPredicted RBP11.77□□□□□ -0.52
USP35-207ENST00000530546 E2F8A0AVK6 867 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 CCDC78A2IDD5 438 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 RFPL1O75677 317 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 DDHD2O94830 711 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 MOCS2O96007 188 aaPredicted RBP11.77□□□□□ -0.53
USP35-207ENST00000530546 F9P00740 461 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 RPL5P46777 297 aaKnown RBP11.77□□□□□ -0.53
USP35-207ENST00000530546 CXCR3P49682 368 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 SP3Q02447 781 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 YWHAHQ04917 246 aaPredicted RBP11.77□□□□□ -0.53
USP35-207ENST00000530546 SEMA3BQ13214 749 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 SLC39A12Q504Y0 691 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 RIPOR1Q6ZS17 1223 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 RNF180Q86T96 592 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 RTN4RL1Q86UN2 441 aaPredicted RBP11.77□□□□□ -0.53
USP35-207ENST00000530546 CCDC97Q96F63 343 aaPredicted RBP11.77□□□□□ -0.53
USP35-207ENST00000530546 PRICKLE1Q96MT3 831 aaPredicted RBP11.77□□□□□ -0.53
USP35-207ENST00000530546 LBHD1Q9BQE6 289 aaPredicted RBP11.77□□□□□ -0.53
USP35-207ENST00000530546 TSSK1BQ9BXA7 367 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 VPS11Q9H270 941 aa11.77□□□□□ -0.53
USP35-207ENST00000530546 A0A0G2JND7 137 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 HMX2A2RU54 273 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 DFFAO00273 331 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 TM7SF2O76062 418 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 JCHAINP01591 159 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms