RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TNIP2Q8NFZ5 429 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 P2RY11Q96G91 374 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 C12orf42Q96LP6 360 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 ZNF512Q96ME7 567 aaPredicted RBP18.05■□□□□ 0.48
NUP54-205ENST00000507257 C1QTNF1Q9BXJ1 281 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 NSMCE4AQ9NXX6 385 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 ZDHHC2Q9UIJ5 367 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 DOCK1Q14185 1865 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 TRPC5OSA6NMA1 111 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 DDHD2O94830 711 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 AMHP03971 560 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 BMP2P12643 396 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 UBA1P22314 1058 aaKnown RBP18.04■□□□□ 0.48
NUP54-205ENST00000507257 VARSP26640 1264 aaKnown RBP18.04■□□□□ 0.48
NUP54-205ENST00000507257 PSMB4P28070 264 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 HMOX2P30519 316 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 MSX2P35548 267 aaPredicted RBP18.04■□□□□ 0.48
NUP54-205ENST00000507257 GMPRP36959 345 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 ARL4AP40617 200 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 BACE1P56817 501 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 NRF1Q16656 503 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 ANO4Q32M45 955 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 ELMSAN1Q6PJG2 1045 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 STYXQ8WUJ0 223 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 ZNF669Q96BR6 464 aaPredicted RBP18.04■□□□□ 0.48
NUP54-205ENST00000507257 ISOC1Q96CN7 298 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 DOK1Q99704 481 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 FTHL17Q9BXU8 183 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 HIPK3Q9H422 1215 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 CAAP1Q9H8G2 361 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 DUS2Q9NX74 493 aaKnown RBP18.04■□□□□ 0.48
NUP54-205ENST00000507257 TRIP11Q15643 1979 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 KDM4FA0A1W2PPD8 638 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 TRIM64BA6NI03 449 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 ERI2A8K979 691 aaKnown RBP18.04■□□□□ 0.48
NUP54-205ENST00000507257 STX16-NPEPL1H3BU86 382 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 NPHS1O60500 1241 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 CYP2C9P11712 490 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 ZNF12P17014 697 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 RGS7P49802 495 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 ENTPD1P49961 510 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 OSTNP61366 133 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 MPP3Q13368 585 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 TMEM132BQ14DG7 1078 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 KYAT1Q16773 422 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 PDCD4Q53EL6 469 aaKnown RBP18.04■□□□□ 0.48
NUP54-205ENST00000507257 HACD2Q6Y1H2 254 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 CHSY3Q70JA7 882 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 LSMEM2Q8N112 164 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 PELI3Q8N2H9 469 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 RNF148Q8N7C7 305 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 TFAP2CQ92754 450 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 SLCO4A1Q96BD0 722 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 WRNIP1Q96S55 665 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 GPR22Q99680 433 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 NFKBIZQ9BYH8 718 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 LRRC4Q9HBW1 653 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 CASS4Q9NQ75 786 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 ARMC1Q9NVT9 282 aa18.04■□□□□ 0.48
NUP54-205ENST00000507257 ZNF219Q9P2Y4 722 aaPredicted RBP18.04■□□□□ 0.48
NUP54-205ENST00000507257 TARM1B6A8C7 271 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 SBK3P0C264 359 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 MCF2P10911 925 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 YY1P25490 414 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 POLD2P49005 469 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 RPL34P49207 117 aaKnown RBP18.03■□□□□ 0.48
NUP54-205ENST00000507257 LRP8Q14114 963 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 ZNF829Q3KNS6 432 aaPredicted RBP18.03■□□□□ 0.48
NUP54-205ENST00000507257 NT5DC4Q86YG4 428 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 TMEM192Q8IY95 271 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 COLGALT2Q8IYK4 626 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 ANKRD52Q8NB46 1076 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 SEPT1Q8WYJ6 367 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 LRTOMTQ8WZ04 291 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 BORCS5Q969J3 196 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 PBXIP1Q96AQ6 731 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 TMA16Q96EY4 203 aaKnown RBP18.03■□□□□ 0.48
NUP54-205ENST00000507257 TEPSINQ96N21 525 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 TSNARE1Q96NA8 513 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 LGMNQ99538 433 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 PALMDQ9NP74 551 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 C8orf4Q9NR00 106 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 TBC1D23Q9NUY8 699 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 BFARQ9NZS9 450 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 CD300AQ9UGN4 299 aa18.03■□□□□ 0.48
NUP54-205ENST00000507257 DYTNA2CJ06 578 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 HEATR9A2RTY3 570 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 XPO1O14980 1071 aaKnown RBP18.02■□□□□ 0.48
NUP54-205ENST00000507257 MFSD11O43934 449 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 CAPN15O75808 1086 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 AP2A1O95782 977 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 STAG3L1P0CL83 205 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 C7P10643 843 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 RBP5P82980 135 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 MBTD1Q05BQ5 628 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 IFRD2Q12894 506 aaPredicted RBP18.02■□□□□ 0.48
NUP54-205ENST00000507257 FAM187BQ17R55 369 aa18.02■□□□□ 0.48
NUP54-205ENST00000507257 INTS11Q5TA45 600 aaKnown RBP18.02■□□□□ 0.48
NUP54-205ENST00000507257 TMEM198Q66K66 360 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms