RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 GDF3Q9NR23 364 aa20.2■□□□□ 0.82
SFXN1-203ENST00000502393 METTL5Q9NRN9 209 aaKnown RBP20.2■□□□□ 0.82
SFXN1-203ENST00000502393 ANO10Q9NW15 660 aa20.2■□□□□ 0.82
SFXN1-203ENST00000502393 PPARGC1AQ9UBK2 798 aaKnown RBP20.2■□□□□ 0.82
SFXN1-203ENST00000502393 DMTF1Q9Y222 760 aa20.2■□□□□ 0.82
SFXN1-203ENST00000502393 SIK3Q9Y2K2 1263 aa20.2■□□□□ 0.82
SFXN1-203ENST00000502393 TLR4O00206 839 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 WNT9AO14904 365 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 EPHB6O15197 1021 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 YKT6O15498 198 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 BNIP3LO60238 219 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 ATXN1LP0C7T5 689 aaKnown RBP20.19■□□□□ 0.82
SFXN1-203ENST00000502393 ATP11AP98196 1134 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 IL9RQ01113 521 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 CCDC15Q0P6D6 951 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 NAPEPLDQ6IQ20 393 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 CCNI2Q6ZMN8 369 aaPredicted RBP20.19■□□□□ 0.82
SFXN1-203ENST00000502393 EMC1Q8N766 993 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 MFSD2AQ8NA29 543 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 TMIEQ8NEW7 156 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 OR2A12Q8NGT7 310 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 PREBQ9HCU5 417 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 ZNF212Q9UDV6 495 aa20.19■□□□□ 0.82
SFXN1-203ENST00000502393 K7ERQ8 282 aa20.18■□□□□ 0.82
SFXN1-203ENST00000502393 SMAD6O43541 496 aaKnown RBP20.18■□□□□ 0.82
SFXN1-203ENST00000502393 CTSLP07711 333 aa20.18■□□□□ 0.82
SFXN1-203ENST00000502393 RRM1P23921 792 aa20.18■□□□□ 0.82
SFXN1-203ENST00000502393 CHRNA3P32297 505 aa20.18■□□□□ 0.82
SFXN1-203ENST00000502393 COPB1P53618 953 aaKnown RBP20.18■□□□□ 0.82
SFXN1-203ENST00000502393 MYL5Q02045 173 aa20.18■□□□□ 0.82
SFXN1-203ENST00000502393 SLC20A2Q08357 652 aa20.18■□□□□ 0.82
SFXN1-203ENST00000502393 ARL13BQ3SXY8 428 aa20.18■□□□□ 0.82
SFXN1-203ENST00000502393 POM121L1PQ3SYA9 428 aa20.18■□□□□ 0.82
SFXN1-203ENST00000502393 IQCHQ86VS3 1027 aa20.18■□□□□ 0.82
SFXN1-203ENST00000502393 SLC30A5Q8TAD4 765 aa20.18■□□□□ 0.82
SFXN1-203ENST00000502393 RETREG1Q9H6L5 497 aa20.18■□□□□ 0.82
SFXN1-203ENST00000502393 ERVMER34-1Q9H9K5 563 aa20.18■□□□□ 0.82
SFXN1-203ENST00000502393 LIMA1Q9UHB6 759 aaKnown RBP20.18■□□□□ 0.82
SFXN1-203ENST00000502393 LRRC10BA6NIK2 292 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 GOLGA6L22H0YM25 854 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 PRNPP04156 253 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 UNGP13051 313 aaPredicted RBP20.17■□□□□ 0.82
SFXN1-203ENST00000502393 MAT2AP31153 395 aaKnown RBP20.17■□□□□ 0.82
SFXN1-203ENST00000502393 SDC4P31431 198 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 ARRB1P49407 418 aaPredicted RBP20.17■□□□□ 0.82
SFXN1-203ENST00000502393 NXPH1P58417 271 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 NRG1Q02297 640 aaPredicted RBP20.17■□□□□ 0.82
SFXN1-203ENST00000502393 OVGP1Q12889 678 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 SYCP1Q15431 976 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 CCDC14Q49A88 953 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 PRAMEF14Q5SWL7 426 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 PIP5KL1Q5T9C9 394 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 RETSATQ6NUM9 610 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 NEK5Q6P3R8 708 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 LINGO4Q6UY18 593 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 TMPRSS7Q7RTY8 843 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 OXR1Q8N573 874 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 NEK11Q8NG66 645 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 OR7D4Q8NG98 312 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 SAP25Q8TEE9 199 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 RXFP2Q8WXD0 754 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 PCMTD1Q96MG8 357 aaPredicted RBP20.17■□□□□ 0.82
SFXN1-203ENST00000502393 C11orf70Q9BRQ4 267 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 SPON2Q9BUD6 331 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 CEP44Q9C0F1 390 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 OR12D3Q9UGF7 316 aa20.17■□□□□ 0.82
SFXN1-203ENST00000502393 C2CD4BA6NLJ0 364 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 GOLGA8CPA6NN73 597 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 SRRM3A6NNA2 597 aaPredicted RBP20.16■□□□□ 0.82
SFXN1-203ENST00000502393 LGALS16A8MUM7 142 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 CBX4O00257 560 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 KPNA3O00505 521 aaPredicted RBP20.16■□□□□ 0.82
SFXN1-203ENST00000502393 ZZEF1O43149 2961 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 MAGEC1O60732 1142 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 ITGAVP06756 1048 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 GLDCP23378 1020 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 ADRA1BP35368 520 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 PTPN9P43378 593 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 RECQLP46063 649 aaPredicted RBP20.16■□□□□ 0.82
SFXN1-203ENST00000502393 NSFP46459 744 aaKnown RBP20.16■□□□□ 0.82
SFXN1-203ENST00000502393 GSCP56915 257 aaPredicted RBP20.16■□□□□ 0.82
SFXN1-203ENST00000502393 TAS2R38P59533 333 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 GNA12Q03113 381 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 STAT4Q14765 748 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 SHBQ15464 509 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 STX1AQ16623 288 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 CDO1Q16878 200 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 C15orf59Q2T9L4 293 aaPredicted RBP20.16■□□□□ 0.82
SFXN1-203ENST00000502393 SETMARQ53H47 684 aaPredicted RBP20.16■□□□□ 0.82
SFXN1-203ENST00000502393 C22orf39Q6P5X5 142 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 STRADAQ7RTN6 431 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 OSBPL2Q9H1P3 480 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 ATP13A1Q9HD20 1204 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 DYRK4Q9NR20 520 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 FTSJ1Q9UET6 329 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 IL36AQ9UHA7 158 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 FREM2Q5SZK8 3169 aa20.16■□□□□ 0.82
SFXN1-203ENST00000502393 CXorf51AA0A1B0GTR3 108 aa20.15■□□□□ 0.82
SFXN1-203ENST00000502393 PRAMEF26H0Y7S4 382 aa20.15■□□□□ 0.82
SFXN1-203ENST00000502393 RNGTTO60942 597 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms