RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 GOLGA6L4A6NEF3 574 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 A6NNZ2 444 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 H3BM21 787 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 SCAMP1O15126 338 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 THAP12O43422 761 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 CLDN11O75508 207 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 PRNPP04156 253 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 MYF5P13349 255 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 CHRNA3P32297 505 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 RECQLP46063 649 aaPredicted RBP14.61□□□□□ -0.07
VARS-228ENST00000495010 HNRNPKP61978 463 aaKnown RBP eCLIP14.61□□□□□ -0.07
VARS-228ENST00000495010 PITX1P78337 314 aaPredicted RBP14.61□□□□□ -0.07
VARS-228ENST00000495010 VAC14Q08AM6 782 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 MEA1Q16626 185 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 ZNF284Q2VY69 593 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 PTAR1Q7Z6K3 402 aaPredicted RBP14.61□□□□□ -0.07
VARS-228ENST00000495010 DCP2Q8IU60 420 aaKnown RBP14.61□□□□□ -0.07
VARS-228ENST00000495010 DEFB106AQ8N104 65 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 TMIEQ8NEW7 156 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 LMO3Q8TAP4 145 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 IFI44Q8TCB0 444 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 CCDC97Q96F63 343 aaPredicted RBP14.61□□□□□ -0.07
VARS-228ENST00000495010 IFT43Q96FT9 208 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 DHTKD1Q96HY7 919 aaPredicted RBP14.61□□□□□ -0.07
VARS-228ENST00000495010 PPP1R16AQ96I34 528 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 VCPIP1Q96JH7 1222 aa14.61□□□□□ -0.07
VARS-228ENST00000495010 C2orf49Q9BVC5 232 aaPredicted RBP14.61□□□□□ -0.07
VARS-228ENST00000495010 IPO11Q9UI26 975 aaKnown RBP14.61□□□□□ -0.07
VARS-228ENST00000495010 HOOK1Q9UJC3 728 aaKnown RBP14.61□□□□□ -0.07
VARS-228ENST00000495010 GLI1P08151 1106 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 SRCP12931 536 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 GNA15P30679 374 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 CDH4P55283 916 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 CLDN2P57739 230 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 NME3Q13232 169 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 MAPK8IP2Q13387 824 aaPredicted RBP14.6□□□□□ -0.07
VARS-228ENST00000495010 LY6DQ14210 128 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 TAF5Q15542 800 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 ZNF542PQ5EBM4 170 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 C3orf38Q5JPI3 329 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 EFHC1Q5JVL4 640 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 Q6ZSR6 202 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 ERN2Q76MJ5 926 aaKnown RBP14.6□□□□□ -0.07
VARS-228ENST00000495010 FAM181AQ8N9Y4 354 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 ZNF606Q8WXB4 792 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 ALG14Q96F25 216 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 SIK2Q9H0K1 926 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 NCKIPSDQ9NZQ3 722 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 HS3ST4Q9Y661 456 aa14.6□□□□□ -0.07
VARS-228ENST00000495010 CPED1A4D0V7 1026 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 B8ZZF3 427 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 K7ESM1 405 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 HSF2BPO75031 334 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 NEBLO76041 1014 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 CTSLP07711 333 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 RHOCP08134 193 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 GIMD1P0DJR0 217 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 C6P13671 934 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 PPP1R2P41236 205 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 PDCLQ13371 301 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 EIF4EBP2Q13542 120 aaPredicted RBP14.59□□□□□ -0.07
VARS-228ENST00000495010 ISXQ2M1V0 245 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 OR6B2Q6IFH4 312 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 ZCCHC8Q6NZY4 707 aaKnown RBP14.59□□□□□ -0.07
VARS-228ENST00000495010 GCNT7Q6ZNI0 430 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 ABI3BPQ7Z7G0 1075 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 OR52K2Q8NGK3 314 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 GRIN3AQ8TCU5 1115 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 ARRDC3Q96B67 414 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 GRAMD1AQ96CP6 724 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 KREMEN1Q96MU8 473 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 NOX5Q96PH1 765 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 SLC2A13Q96QE2 648 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 INTS2Q9H0H0 1204 aaKnown RBP14.59□□□□□ -0.07
VARS-228ENST00000495010 GDPD2Q9HCC8 539 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 UBE2TQ9NPD8 197 aaPredicted RBP14.59□□□□□ -0.07
VARS-228ENST00000495010 ASNSD1Q9NWL6 643 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 IL36AQ9UHA7 158 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 SATB2Q9UPW6 733 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 CNTN6Q9UQ52 1028 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 HS3ST2Q9Y278 367 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 TBC1D30Q9Y2I9 924 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 ZDHHC9Q9Y397 364 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 OR51B4Q9Y5P0 310 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 HS3ST3A1Q9Y663 406 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 DOCK9Q9BZ29 2069 aa14.59□□□□□ -0.07
VARS-228ENST00000495010 TDRD6O60522 2096 aaKnown RBP14.58□□□□□ -0.08
VARS-228ENST00000495010 RIOK3O14730 519 aaKnown RBP14.58□□□□□ -0.08
VARS-228ENST00000495010 GRAP2O75791 330 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 MT-CO1P00395 513 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 RRM1P23921 792 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 GGCXP38435 758 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 USP8P40818 1118 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 IRAK1P51617 712 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 SNX16P57768 344 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 RPS21P63220 83 aaKnown RBP14.58□□□□□ -0.08
VARS-228ENST00000495010 CDKN3Q16667 212 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 ARSIQ5FYB1 569 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 SEL1L3Q68CR1 1132 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 ISM2Q6H9L7 571 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms