RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, human

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRAT1-205	ENST00000473879	CISD3	P0C7P0	127 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	PECAM1	P16284	738 aa	Predicted RBP	13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	RHOQ	P17081	205 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	TIE1	P35590	1138 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	EIF3E	P60228	445 aa	Known RBP	13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	DR1	Q01658	176 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	XRCC4	Q13426	336 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	SNX1	Q13596	522 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	NADSYN1	Q6IA69	706 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	ZNF683	Q8IZ20	524 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	LGI2	Q8N0V4	545 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	RTL3	Q8N8U3	475 aa	Known RBP	13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	IL17RC	Q8NAC3	791 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	ATL2	Q8NHH9	583 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	SLC35B2	Q8TB61	432 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	RUBCN	Q92622	972 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	SLCO2A1	Q92959	643 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	EBF1	Q9UH73	591 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	SMG5	Q9UPR3	1016 aa	Known RBP	13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	CFAP69	A5D8W1	941 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	DRGX	A6NNA5	263 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	HACD1	B0YJ81	288 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	PPP1R12A	O14974	1030 aa	Predicted RBP	13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	TRIM24	O15164	1050 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	CTIF	O43310	598 aa	Known RBP	13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	MFSD11	O43934	449 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	APBB3	O95704	486 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	CYBB	P04839	570 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	ITGAV	P06756	1048 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	RBP3	P10745	1247 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	MX2	P20592	715 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	PXN	P49023	591 aa	Predicted RBP	13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	DGKG	P49619	791 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	PDK1	Q15118	436 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	OASL	Q15646	514 aa	Known RBP	13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	CRY1	Q16526	586 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	C5orf22	Q49AR2	442 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	EOGT	Q5NDL2	527 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	EMC10	Q5UCC4	262 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	FBXL22	Q6P050	247 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	TTC27	Q6P3X3	843 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	NPNT	Q6UXI9	565 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	TRMT11	Q7Z4G4	463 aa	Known RBP	13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	C14orf80	Q86SX3	495 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	ALLC	Q8N6M5	410 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	TXNDC5	Q8NBS9	432 aa	Known RBP	13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	HHIP	Q96QV1	700 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	FAM118B	Q9BPY3	351 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	FERMT1	Q9BQL6	677 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	BRD8	Q9H0E9	1235 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	RAB17	Q9H0T7	212 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	ETNK2	Q9NVF9	386 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	TMEM248	Q9NWD8	314 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	PLK2	Q9NYY3	685 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	DTL	Q9NZJ0	730 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	AMACR	Q9UHK6	382 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	DNPEP	Q9ULA0	475 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	RAB23	Q9ULC3	237 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	ZNF148	Q9UQR1	794 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	DRG1	Q9Y295	367 aa	Known RBP	13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	SLC27A6	Q9Y2P4	619 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	EML5	Q05BV3	1969 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	FRYL	O94915	3013 aa		13.57	□□□□□ -0.24
BRAT1-205	ENST00000473879	DOCK4	Q8N1I0	1966 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	GOLGA6L7	A0A1B0GV03	622 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	TARSL2	A2RTX5	802 aa	Known RBP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879		H7C0C1	242 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	AXIN1	O15169	862 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	RAD51C	O43502	376 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	KLF8	O95600	359 aa	Predicted RBP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	TUBB	P07437	444 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	RHOXF2B	P0C7M4	288 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	MCM3	P25205	808 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	SLC6A4	P31645	630 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	ATP5O	P48047	213 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	MAPKAPK2	P49137	400 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	DGKE	P52429	567 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	CDH4	P55283	916 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	GBE1	Q04446	702 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	SIM2	Q14190	667 aa	Predicted RBP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	PPP1R7	Q15435	360 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	ERCC6L	Q2NKX8	1250 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	MPPE1	Q53F39	396 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	MPP7	Q5T2T1	576 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	DARS2	Q6PI48	645 aa	Known RBP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	CHST9	Q7L1S5	443 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	GSTA5	Q7RTV2	222 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	ZC3H18	Q86VM9	953 aa	Known RBP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	NLRP14	Q86W24	1093 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	CCDC33	Q8N5R6	958 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	GPR161	Q8N6U8	529 aa	Known RBP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	HJURP	Q8NCD3	748 aa	Predicted RBP	13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	TSTD1	Q8NFU3	115 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	CCHCR1	Q8TD31	782 aa		13.56	□□□□□ -0.24
BRAT1-205	ENST00000473879	GAB3	Q8WWW8	586 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms