RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 LRRK2Q5S007 2527 aa17.65■□□□□ 0.42
UBE2D4-209ENST00000454428 A0A1B0GVL5 298 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 CPED1A4D0V7 1026 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 EME2A4GXA9 379 aaPredicted RBP17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 PAEPP09466 180 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 PFKFB1P16118 471 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 HNRNPKP61978 463 aaKnown RBP eCLIP17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 DPYDQ12882 1025 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 LRMPQ12912 555 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 SRSF6Q13247 344 aaKnown RBP17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 TMEM259Q4ZIN3 620 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 TPRG1LQ5T0D9 272 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 FOXR1Q6PIV2 292 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 TMEM270Q6UE05 265 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 RBM44Q6ZP01 1051 aaKnown RBP17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 SH2D3CQ8N5H7 860 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 FEM1AQ9BSK4 669 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 ATXN7L1Q9ULK2 861 aaPredicted RBP17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 HPSEQ9Y251 543 aa17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 HEMK1Q9Y5R4 338 aaPredicted RBP17.64■□□□□ 0.41
UBE2D4-209ENST00000454428 POM121BA6NF01 834 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 TCAF2A6NFQ2 919 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 F5H5T6 163 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 RAD51BO15315 384 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 SUV39H1O43463 412 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 NOBOXO60393 691 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 STX10O60499 249 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 TNFSF15O95150 251 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 MT-CO1P00395 513 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 APOEP02649 317 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 CSF2P04141 144 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 NME1P15531 152 aaKnown RBP17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 ZNF18P17022 549 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 YWHAEP62258 255 aaKnown RBP17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 CENPCQ03188 943 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 EDRF1Q3B7T1 1238 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 C6orf132Q5T0Z8 1188 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 BEND5Q7L4P6 421 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 PTAR1Q7Z6K3 402 aaPredicted RBP17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 OR2A12Q8NGT7 310 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 KAT5Q92993 513 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 RCOR1Q9UKL0 485 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 CSNK1G3Q9Y6M4 447 aa17.63■□□□□ 0.41
UBE2D4-209ENST00000454428 SPTY2D1-AS1A0A0U1RR47 76 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 A6NNZ2 444 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 KCNU1A8MYU2 1149 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 BNIP3LO60238 219 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 TCEA3O75764 348 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 SRCP12931 536 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 MLLT3P42568 568 aaPredicted RBP17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 DEFB133Q30KQ1 61 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 ARL14Q8N4G2 192 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 WDR36Q8NI36 951 aaKnown RBP17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 EXTL1Q92935 676 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 FAM149B1Q96BN6 582 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 EVA1BQ9NVM1 165 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 SLC25A13Q9UJS0 675 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 HS3ST3A1Q9Y663 406 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 SCN8AQ9UQD0 1980 aa17.62■□□□□ 0.41
UBE2D4-209ENST00000454428 K7ERQ8 282 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 KPNA3O00505 521 aaPredicted RBP17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 SPINT1O43278 529 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 TRUB2O95900 331 aaKnown RBP17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 ITGA2BP08514 1039 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 EPB41P11171 864 aaKnown RBP17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 CHRNA3P32297 505 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 GPD2P43304 727 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 NUCB2P80303 420 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 TGIF1Q15583 401 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 DCAF17Q5H9S7 520 aaPredicted RBP17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 TTC39BQ5VTQ0 682 aaPredicted RBP17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 FBXL22Q6P050 247 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 KYAT3Q6YP21 454 aaKnown RBP17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 ATG14Q6ZNE5 492 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 DCP2Q8IU60 420 aaKnown RBP17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 CHST14Q8NCH0 376 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 TMIEQ8NEW7 156 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 BOCQ9BWV1 1114 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 USP25Q9UHP3 1055 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 SALL4Q9UJQ4 1053 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 HS3ST2Q9Y278 367 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 PCDHB4Q9Y5E5 795 aa17.61■□□□□ 0.41
UBE2D4-209ENST00000454428 UTP20O75691 2785 aaKnown RBP17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 AQP9O43315 295 aa17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 PCDH8O95206 1070 aa17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 TBXAS1P24557 533 aaPredicted RBP17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 NR0B2Q15466 257 aa17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 TCERG1LQ5VWI1 586 aa17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 PARGQ86W56 976 aa17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 SLC35F3Q8IY50 421 aa17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 SMYD4Q8IYR2 804 aaPredicted RBP17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 ATP6V0D2Q8N8Y2 350 aa17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 TPCN2Q8NHX9 752 aa17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 PSMB7Q99436 277 aa17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 HDAC8Q9BY41 377 aa17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 TCEAL2Q9H3H9 227 aaPredicted RBP17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 NCKIPSDQ9NZQ3 722 aa17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 PNMA8BQ9ULN7 279 aaPredicted RBP17.6■□□□□ 0.41
UBE2D4-209ENST00000454428 CCDC187A0A096LP49 1063 aa17.59■□□□□ 0.41
UBE2D4-209ENST00000454428 MUSKO15146 869 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms