RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 GNA12Q03113 381 aa22.51■■□□□ 1.19
VSX1-205ENST00000429762 TMED2Q15363 201 aa22.51■■□□□ 1.19
VSX1-205ENST00000429762 ANO4Q32M45 955 aa22.51■■□□□ 1.19
VSX1-205ENST00000429762 TTC19Q6DKK2 380 aaPredicted RBP22.51■■□□□ 1.19
VSX1-205ENST00000429762 UNC5AQ6ZN44 842 aa22.51■■□□□ 1.19
VSX1-205ENST00000429762 ARNTL2Q8WYA1 636 aa22.51■■□□□ 1.19
VSX1-205ENST00000429762 EBNA1BP2Q99848 306 aaKnown RBP22.51■■□□□ 1.19
VSX1-205ENST00000429762 CCL26Q9Y258 94 aa22.51■■□□□ 1.19
VSX1-205ENST00000429762 NOTCH4Q99466 2003 aa22.51■■□□□ 1.19
VSX1-205ENST00000429762 TCRBV9S1A1TA0A576 114 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 IVLP07476 585 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 RHOCP08134 193 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 SLC7A9P82251 487 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 ITKQ08881 620 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 PRPSAP1Q14558 356 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 SMAD1Q15797 465 aaKnown RBP22.5■■□□□ 1.19
VSX1-205ENST00000429762 COL13A1Q5TAT6 717 aaPredicted RBP22.5■■□□□ 1.19
VSX1-205ENST00000429762 IL31Q6EBC2 164 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 LRRC49Q8IUZ0 686 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 BBS7Q8IWZ6 715 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 HCFC2Q9Y5Z7 792 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 GJB3O75712 270 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 TCEA3O75764 348 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 PTPN2P17706 415 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 KDELC2Q7Z4H8 507 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 CARNMT1Q8N4J0 409 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 C12orf76Q8N812 135 aaPredicted RBP22.5■■□□□ 1.19
VSX1-205ENST00000429762 IPMKQ8NFU5 416 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 STAMBPL1Q96FJ0 436 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 FCRL5Q96RD9 977 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 STOML2Q9UJZ1 356 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 SH3BP1Q9Y3L3 701 aa22.5■■□□□ 1.19
VSX1-205ENST00000429762 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.49■■□□□ 1.19
VSX1-205ENST00000429762 EPOPA6NHQ4 379 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 LEFTY2O00292 366 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 CACNG3O60359 315 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 CLDN11O75508 207 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 SUN1O94901 812 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 MLNP12872 115 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 TPH1P17752 444 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 HOXD9P28356 352 aaPredicted RBP22.49■■□□□ 1.19
VSX1-205ENST00000429762 YBEYP58557 167 aaPredicted RBP22.49■■□□□ 1.19
VSX1-205ENST00000429762 ZNF177Q13360 481 aaPredicted RBP22.49■■□□□ 1.19
VSX1-205ENST00000429762 MARC1Q5VT66 337 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 GRASPQ7Z6J2 395 aaPredicted RBP22.49■■□□□ 1.19
VSX1-205ENST00000429762 PGBD5Q8N414 524 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 DNAAF3Q8N9W5 541 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 RIN3Q8TB24 985 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 DDX50Q9BQ39 737 aaKnown RBP22.49■■□□□ 1.19
VSX1-205ENST00000429762 ACSS3Q9H6R3 686 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 LSM7Q9UK45 103 aaKnown RBP22.49■■□□□ 1.19
VSX1-205ENST00000429762 HELZP42694 1942 aaKnown RBP22.49■■□□□ 1.19
VSX1-205ENST00000429762 CHD5Q8TDI0 1954 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 A0A1B0GVM2 712 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 TCAF2A6NFQ2 919 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 PRAMEF11O60813 436 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 PMPCBO75439 489 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 AGTP01019 485 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 MMP13P45452 471 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 DSC2Q02487 901 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 IL10RBQ08334 325 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 CBLBQ13191 982 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 FSCBQ5H9T9 825 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 CXorf57Q6NSI4 855 aaKnown RBP22.49■■□□□ 1.19
VSX1-205ENST00000429762 TRMT10BQ6PF06 316 aaKnown RBP22.49■■□□□ 1.19
VSX1-205ENST00000429762 CES3Q6UWW8 571 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 CROCCP2Q86T23 111 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 UNC5BQ8IZJ1 945 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 ING5Q8WYH8 240 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 FICDQ9BVA6 458 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 CASS4Q9NQ75 786 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 EURLQ9NYK6 297 aa22.49■■□□□ 1.19
VSX1-205ENST00000429762 SDR42E2A6NKP2 422 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 CREB1P16220 341 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 RENBPP51606 427 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 EPHA5P54756 1037 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 NIPAL4Q0D2K0 466 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 HNRNPDQ14103 355 aaKnown RBP22.48■■□□□ 1.19
VSX1-205ENST00000429762 PCSK7Q16549 785 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 KBTBD12Q3ZCT8 623 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 TNFAIP8L3Q5GJ75 292 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 CERCAMQ5T4B2 595 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 RNF219Q5W0B1 726 aaPredicted RBP22.48■■□□□ 1.19
VSX1-205ENST00000429762 KDM7AQ6ZMT4 941 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 CHST9Q7L1S5 443 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 WFDC5Q8TCV5 224 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 LRRC39Q96DD0 335 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 SAMD11Q96NU1 681 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 LRRC40Q9H9A6 602 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 PDFQ9HBH1 243 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 PLK2Q9NYY3 685 aa22.48■■□□□ 1.19
VSX1-205ENST00000429762 CCDC195A0A1B0GUA6 201 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 RFXAPO00287 272 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 TSHRP16473 764 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 LBRQ14739 615 aaKnown RBP22.47■■□□□ 1.19
VSX1-205ENST00000429762 POTEHQ6S545 545 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 SH3RF2Q8TEC5 729 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 NSMCE1Q8WV22 266 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 PAFAH2Q99487 392 aa22.47■■□□□ 1.19
VSX1-205ENST00000429762 MAGEH1Q9H213 219 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms