RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 DYRK4Q9NR20 520 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 TMEM248Q9NWD8 314 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 MYO1AQ9UBC5 1043 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 CNOT8Q9UFF9 292 aaKnown RBP11.47□□□□□ -0.57
RFFL-204ENST00000414419 ADAMTS1Q9UHI8 967 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 FZD10Q9ULW2 581 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 CAPN11Q9UMQ6 739 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.47□□□□□ -0.57
RFFL-204ENST00000414419 CACNA1AO00555 2505 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 PCNX2A6NKB5 2137 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 FAM72CH0Y354 149 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 RAMP2O60895 175 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 MT-CO1P00395 513 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 TPM1P09493 284 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 EPHB2P29323 1055 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 DNA2P51530 1060 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 GALCP54803 685 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 GEMIN4P57678 1058 aaKnown RBP11.46□□□□□ -0.57
RFFL-204ENST00000414419 CCDC15Q0P6D6 951 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 POLD3Q15054 466 aaPredicted RBP11.46□□□□□ -0.57
RFFL-204ENST00000414419 TEAD4Q15561 434 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 FAM72AQ5TYM5 149 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 MANEALQ5VSG8 457 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 KIAA0895LQ68EN5 471 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 FAM72DQ6L9T8 149 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 NCEH1Q6PIU2 408 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.46□□□□□ -0.57
RFFL-204ENST00000414419 FAM72BQ86X60 149 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 MINDY1Q8N5J2 469 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 OR2T34Q8NGX1 318 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 PIP4K2CQ8TBX8 421 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 BIRC7Q96CA5 298 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 NCAPGQ9BPX3 1015 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 MAGEB5Q9BZ81 275 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 ZDHHC5Q9C0B5 715 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 XPO4Q9C0E2 1151 aaKnown RBP11.46□□□□□ -0.57
RFFL-204ENST00000414419 MAGEH1Q9H213 219 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 CATSPERBQ9H7T0 1116 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 FSCN3Q9NQT6 498 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 DONSONQ9NYP3 566 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 SERGEFQ9UGK8 458 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 DOCK9Q9BZ29 2069 aa11.46□□□□□ -0.57
RFFL-204ENST00000414419 PCDH15Q96QU1 1955 aa11.46□□□□□ -0.58
RFFL-204ENST00000414419 TP53BP1Q12888 1972 aaPredicted RBP11.45□□□□□ -0.58
RFFL-204ENST00000414419 TBC1D3DA0A087WVF3 549 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 TBC1D3IA0A087WXS9 549 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 TBC1D3EA0A087X179 549 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 TBC1D3KA0A087X1G2 549 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 MED19A0JLT2 244 aaPredicted RBP11.45□□□□□ -0.58
RFFL-204ENST00000414419 TBC1D3FA6NER0 549 aaPredicted RBP11.45□□□□□ -0.58
RFFL-204ENST00000414419 TMEM191CA6NGB0 347 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 TBC1D3LB9A6J9 549 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 K7ERQ8 282 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 TM4SF5O14894 197 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 SMAD6O43541 496 aaKnown RBP11.45□□□□□ -0.58
RFFL-204ENST00000414419 PRPSAP2O60256 369 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 PRNPP04156 253 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 TBC1D3HP0C7X1 549 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 GLDCP23378 1020 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 CD27P26842 260 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 CASP14P31944 242 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 CHRNA3P32297 505 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 SERPINH1P50454 418 aaKnown RBP11.45□□□□□ -0.58
RFFL-204ENST00000414419 NOVA1P51513 510 aaKnown RBP11.45□□□□□ -0.58
RFFL-204ENST00000414419 AFF3P51826 1226 aaKnown RBP11.45□□□□□ -0.58
RFFL-204ENST00000414419 OGDHQ02218 1023 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 TSR1Q2NL82 804 aaKnown RBP11.45□□□□□ -0.58
RFFL-204ENST00000414419 TBC1D3GQ6DHY5 549 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 TBC1D3CQ6IPX1 549 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 C22orf39Q6P5X5 142 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 IL27RAQ6UWB1 636 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 ADAT2Q7Z6V5 191 aaKnown RBP11.45□□□□□ -0.58
RFFL-204ENST00000414419 NLRP14Q86W24 1093 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 DNAAF5Q86Y56 855 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 TBC1D3Q8IZP1 549 aaPredicted RBP11.45□□□□□ -0.58
RFFL-204ENST00000414419 PYROXD2Q8N2H3 581 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 AADATQ8N5Z0 425 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 FNIP1Q8TF40 1166 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 ARHGEF2Q92974 986 aaKnown RBP11.45□□□□□ -0.58
RFFL-204ENST00000414419 CEP44Q9C0F1 390 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 ISCUQ9H1K1 167 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 SLC32A1Q9H598 525 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 ZNF212Q9UDV6 495 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 PPM1HQ9ULR3 514 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 TPX2Q9ULW0 747 aaKnown RBP11.45□□□□□ -0.58
RFFL-204ENST00000414419 CABIN1Q9Y6J0 2220 aa11.45□□□□□ -0.58
RFFL-204ENST00000414419 PLXNA2O75051 1894 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 TMEM131Q92545 1883 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 CXorf51AA0A1B0GTR3 108 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 ZSCAN5CA6NGD5 496 aaPredicted RBP11.44□□□□□ -0.58
RFFL-204ENST00000414419 EIF3CLB5ME19 914 aaKnown RBP11.44□□□□□ -0.58
RFFL-204ENST00000414419 KPNA3O00505 521 aaPredicted RBP11.44□□□□□ -0.58
RFFL-204ENST00000414419 FGF10O15520 208 aaPredicted RBP11.44□□□□□ -0.58
RFFL-204ENST00000414419 SLC7A4O43246 635 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 DAPK3O43293 454 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 KCNK5O95279 499 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 CER1O95813 267 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 GYPCP04921 128 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 HTR7P34969 479 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 ACVRL1P37023 503 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms