RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 CXorf38Q8TB03 319 aa13□□□□□ -0.33
HERC3-203ENST00000407637 PBXIP1Q96AQ6 731 aa13□□□□□ -0.33
HERC3-203ENST00000407637 CNDP2Q96KP4 475 aaKnown RBP13□□□□□ -0.33
HERC3-203ENST00000407637 CLSTN3Q9BQT9 956 aa13□□□□□ -0.33
HERC3-203ENST00000407637 EFHD1Q9BUP0 239 aa13□□□□□ -0.33
HERC3-203ENST00000407637 ZNF385DQ9H6B1 395 aa13□□□□□ -0.33
HERC3-203ENST00000407637 ZBTB26Q9HCK0 441 aa13□□□□□ -0.33
HERC3-203ENST00000407637 IFT80Q9P2H3 777 aaPredicted RBP13□□□□□ -0.33
HERC3-203ENST00000407637 DCDC2Q9UHG0 476 aa13□□□□□ -0.33
HERC3-203ENST00000407637 AP4E1Q9UPM8 1137 aa13□□□□□ -0.33
HERC3-203ENST00000407637 COL5A2P05997 1499 aaPredicted RBP12.99□□□□□ -0.33
HERC3-203ENST00000407637 TCRBV5S1A1TA0A578 114 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 PRORSD1PA6NEY8 169 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 KCNU1A8MYU2 1149 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 H7C0C1 242 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 DDX39AO00148 427 aaKnown RBP12.99□□□□□ -0.33
HERC3-203ENST00000407637 TAF4O00268 1085 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 TPST1O60507 370 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 BMP2P12643 396 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 PRKACBP22694 351 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 PSMA2P25787 234 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 ACADSBP45954 432 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 CCR10P46092 362 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 ATP5OP48047 213 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 GTF2BQ00403 316 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 CYP24A1Q07973 514 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 PLCL1Q15111 1095 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 CCDC81Q6ZN84 652 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 ERMP1Q7Z2K6 904 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 RALGPS2Q86X27 583 aaPredicted RBP12.99□□□□□ -0.33
HERC3-203ENST00000407637 ACMSDQ8TDX5 336 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 LRRN4Q8WUT4 740 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 SEPT8Q92599 483 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 HTRA1Q92743 480 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 TXNDC15Q96J42 360 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 CALN1Q9BXU9 219 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 HACD3Q9P035 362 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 GMPR2Q9P2T1 348 aaKnown RBP12.99□□□□□ -0.33
HERC3-203ENST00000407637 MTRRQ9UBK8 725 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 FBXO9Q9UK97 447 aaPredicted RBP12.99□□□□□ -0.33
HERC3-203ENST00000407637 CENPBD1B2RD01 187 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 LRCH4O75427 683 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 HLCSP50747 726 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 IST1P53990 364 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 RHBDL3P58872 404 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 RPS8P62241 208 aaKnown RBP12.99□□□□□ -0.33
HERC3-203ENST00000407637 HERC3Q15034 1050 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 C6orf10Q5SRN2 563 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 WDR78Q5VTH9 848 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 INTS5Q6P9B9 1019 aaKnown RBP12.99□□□□□ -0.33
HERC3-203ENST00000407637 TRMT1LQ7Z2T5 733 aaKnown RBP12.99□□□□□ -0.33
HERC3-203ENST00000407637 CAMK1DQ8IU85 385 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 ARFGAP1Q8N6T3 406 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 SLC43A3Q8NBI5 491 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 CANT1Q8WVQ1 401 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 ZBED2Q9BTP6 218 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 CRNNQ9UBG3 495 aaPredicted RBP12.99□□□□□ -0.33
HERC3-203ENST00000407637 PCSK1NQ9UHG2 260 aa12.99□□□□□ -0.33
HERC3-203ENST00000407637 RNF103-CHMP3A0A140T963 221 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 HEATR9A2RTY3 570 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 ZSCAN5BA6NJL1 495 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 CCRL2O00421 344 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 KCNN4O15554 427 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 ASNA1O43681 348 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 FOSP01100 380 aaPredicted RBP12.98□□□□□ -0.33
HERC3-203ENST00000407637 JUNP05412 331 aaKnown RBP12.98□□□□□ -0.33
HERC3-203ENST00000407637 FYNP06241 537 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 CDH1P12830 882 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 NCAM1P13591 858 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 TFE3P19532 575 aaPredicted RBP12.98□□□□□ -0.33
HERC3-203ENST00000407637 AOC3Q16853 763 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 LRRC8EQ6NSJ5 796 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 LDHDQ86WU2 507 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 TTC30BQ8N4P2 665 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 ZUFSPQ96AP4 578 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 EBNA1BP2Q99848 306 aaKnown RBP12.98□□□□□ -0.33
HERC3-203ENST00000407637 ADAMTS10Q9H324 1103 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 PSAT1Q9Y617 370 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 COPG1Q9Y678 874 aaKnown RBP12.98□□□□□ -0.33
HERC3-203ENST00000407637 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 M0QX08 132 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 PHGDHO43175 533 aaKnown RBP12.98□□□□□ -0.33
HERC3-203ENST00000407637 IDH3BO43837 385 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 SYNCRIPO60506 623 aaKnown RBP12.98□□□□□ -0.33
HERC3-203ENST00000407637 UGT2B4P06133 528 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 SLURP2P0DP57 97 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 MBL2P11226 248 aaPredicted RBP12.98□□□□□ -0.33
HERC3-203ENST00000407637 CNTFP26441 200 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 LEPRP48357 1165 aaKnown RBP12.98□□□□□ -0.33
HERC3-203ENST00000407637 CHRNEQ04844 493 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 TRIM32Q13049 653 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 SLC13A2Q13183 592 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 MMRN1Q13201 1228 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 SPDYE2Q495Y8 402 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 WDR44Q5JSH3 913 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.98□□□□□ -0.33
HERC3-203ENST00000407637 TMTC4Q5T4D3 741 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 SEL1L3Q68CR1 1132 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 ZNF773Q6PK81 442 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms