RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 KLK14Q9P0G3 267 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 TTLL13PA6NNM8 815 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 SLC28A1O00337 649 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 ALDH9A1P49189 494 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 BCAT1P54687 386 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 XIAPP98170 497 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 RBM43Q6ZSC3 357 aaKnown RBP14.94□□□□□ -0.02
CCDC50-201ENST00000392455 CYLDQ9NQC7 956 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 VANGL2Q9ULK5 521 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 CCL15-CCL14A0A0B4J2E2 113 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 A0A1B0GTH6 734 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 MCIDASD6RGH6 385 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 ZNF432O94892 652 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 POMCP01189 267 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 GJA1P17302 382 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 CCL15Q16663 113 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 ZDHHC17Q8IUH5 632 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 COLGALT2Q8IYK4 626 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 TEX47Q8TBZ9 253 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 DPF2Q92785 391 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 TTLL2Q9BWV7 592 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 DPP3Q9NY33 737 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 SLC26A11Q86WA9 606 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 PHF10Q8WUB8 498 aaKnown RBP14.94□□□□□ -0.02
CCDC50-201ENST00000392455 DNAJA4Q8WW22 397 aaPredicted RBP14.94□□□□□ -0.02
CCDC50-201ENST00000392455 ACSF2Q96CM8 615 aaPredicted RBP14.94□□□□□ -0.02
CCDC50-201ENST00000392455 EURLQ9NYK6 297 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 LIMD1Q9UGP4 676 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 PCDHGB5Q9Y5G0 923 aa14.94□□□□□ -0.02
CCDC50-201ENST00000392455 PLA2R1Q13018 1463 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 ZNF609O15014 1411 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 C17orf102A2RUQ5 167 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 NR2F6P10588 404 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 FASTKQ14296 549 aaKnown RBP14.93□□□□□ -0.02
CCDC50-201ENST00000392455 CPNE2Q96FN4 548 aaPredicted RBP14.93□□□□□ -0.02
CCDC50-201ENST00000392455 GNPTGQ9UJJ9 305 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 FAM25EA8MYX2 175 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 PLOD3O60568 738 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 CST8O60676 142 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 UGT2B15P54855 530 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 RGS8P57771 180 aaPredicted RBP14.93□□□□□ -0.02
CCDC50-201ENST00000392455 SLFN11Q7Z7L1 901 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 USP38Q8NB14 1042 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 PPP1R16AQ96I34 528 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 MAP2P11137 1827 aaKnown RBP14.93□□□□□ -0.02
CCDC50-201ENST00000392455 H3BNX3 289 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 ZNF208O43345 1280 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 TAF6P49848 677 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 MPP3Q13368 585 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 NAA30Q147X3 362 aaPredicted RBP14.93□□□□□ -0.02
CCDC50-201ENST00000392455 NEDD8Q15843 81 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 GNASQ5JWF2 1037 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 DENND5AQ6IQ26 1287 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 IRGCQ6NXR0 463 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 HPS6Q86YV9 775 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 INO80EQ8NBZ0 244 aaPredicted RBP14.93□□□□□ -0.02
CCDC50-201ENST00000392455 FAM111AQ96PZ2 611 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 SQORQ9Y6N5 450 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 RARGP13631 454 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 MFSD7Q6UXD7 560 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 TMC8Q8IU68 726 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 EXO5Q9H790 373 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 MYOZ2Q9NPC6 264 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 FAM172BPA6NC97 362 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 MTHFD1P11586 935 aaKnown RBP14.93□□□□□ -0.02
CCDC50-201ENST00000392455 ZNF3P17036 446 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 EPHB2P29323 1055 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 THPOP40225 353 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 ELAVL2Q12926 359 aaKnown RBP14.93□□□□□ -0.02
CCDC50-201ENST00000392455 CLVS1Q8IUQ0 354 aaPredicted RBP14.93□□□□□ -0.02
CCDC50-201ENST00000392455 DEFB107AQ8IZN7 70 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 OR2W6PQ8NHA6 318 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 CRAMP1Q96RY5 1269 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 TMEM39BQ9GZU3 492 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 CCDC86Q9H6F5 360 aaKnown RBP14.93□□□□□ -0.02
CCDC50-201ENST00000392455 RBM12Q9NTZ6 932 aaKnown RBP14.93□□□□□ -0.02
CCDC50-201ENST00000392455 CNTRLQ7Z7A1 2325 aa14.93□□□□□ -0.02
CCDC50-201ENST00000392455 TRIM64A6NGJ6 449 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 PMPCBO75439 489 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 GRSF1Q12849 480 aaKnown RBP eCLIP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 TOMM20Q15388 145 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 WDR59Q6PJI9 974 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 KIF2BQ8N4N8 673 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 IGDCC4Q8TDY8 1250 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 KCNS3Q9BQ31 491 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 HBP1O60381 514 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 SCGB2A1O75556 95 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 SLC25A27O95847 323 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 SERPINE1P05121 402 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 COILP38432 576 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 MIIPQ5JXC2 388 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 ATG9AQ7Z3C6 839 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 PM20D2Q8IYS1 436 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 CD101Q93033 1021 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 A0A0G2JPF8 293 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 HNRNPCL3B7ZW38 293 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 RAD51CO43502 376 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 TCEA3O75764 348 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 HNRNPCL4P0DMR1 293 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 RBM34P42696 430 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms