RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 CTSHP09668 335 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 ATP6V1C1P21283 382 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 CRABP2P29373 138 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 MXRA7P84157 204 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 TUBB3Q13509 450 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 SLC12A1Q13621 1099 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 RABGAP1LQ5R372 815 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 FAM182AQ5T1J6 154 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 MANEALQ5VSG8 457 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 CES3Q6UWW8 571 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 TP53INP2Q8IXH6 220 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 RBM15BQ8NDT2 890 aaKnown RBP18.38■□□□□ 0.53
CD40-201ENST00000372276 TRPV1Q8NER1 839 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 TTC8Q8TAM2 541 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 FUBP3Q96I24 572 aaKnown RBP eCLIP18.38■□□□□ 0.53
CD40-201ENST00000372276 VPS39Q96JC1 886 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 SORT1Q99523 831 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 AGO3Q9H9G7 860 aaKnown RBP18.38■□□□□ 0.53
CD40-201ENST00000372276 TBC1D13Q9NVG8 400 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 PIH1D1Q9NWS0 290 aaKnown RBP18.38■□□□□ 0.53
CD40-201ENST00000372276 C2orf71A6NGG8 1288 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 ITM2AO43736 263 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 SIN3BO75182 1162 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 USP12O75317 370 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 NEBLO76041 1014 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 EOMESO95936 686 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 CST5P28325 142 aaPredicted RBP18.38■□□□□ 0.53
CD40-201ENST00000372276 ADSLP30566 484 aaPredicted RBP18.38■□□□□ 0.53
CD40-201ENST00000372276 VEGFBP49765 207 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 IDH3AP50213 366 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 CSRP3P50461 194 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 COPAP53621 1224 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 ITGA9Q13797 1035 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 RCN2Q14257 317 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 KPNB1Q14974 876 aaKnown RBP18.38■□□□□ 0.53
CD40-201ENST00000372276 NFE2Q16621 373 aaPredicted RBP18.38■□□□□ 0.53
CD40-201ENST00000372276 PPM1JQ5JR12 505 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 AAGABQ6PD74 315 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 KIAA0408Q6ZU52 694 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 PCSK9Q8NBP7 692 aaKnown RBP18.38■□□□□ 0.53
CD40-201ENST00000372276 DNAJC9Q8WXX5 260 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 MFSD3Q96ES6 412 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 PRR11Q96HE9 360 aaPredicted RBP18.38■□□□□ 0.53
CD40-201ENST00000372276 CAPNS2Q96L46 248 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 FAM167BQ9BTA0 163 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 ILKAPQ9H0C8 392 aaPredicted RBP18.38■□□□□ 0.53
CD40-201ENST00000372276 CDH19Q9H159 772 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 FBXO44Q9H4M3 255 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 CHRAC1Q9NRG0 131 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 IARS2Q9NSE4 1012 aaKnown RBP18.38■□□□□ 0.53
CD40-201ENST00000372276 SLC17A6Q9P2U8 582 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 VTI1BQ9UEU0 232 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 PLA2G4CQ9UP65 541 aa18.38■□□□□ 0.53
CD40-201ENST00000372276 FNDC1Q4ZHG4 1894 aaPredicted RBP18.38■□□□□ 0.53
CD40-201ENST00000372276 PTPRDP23468 1912 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 PRR5-ARHGAP8B1AHC4 643 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 TMEM189-UBE2V1I3L0A0 370 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 CD52P31358 61 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 SERPINB5P36952 375 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 ARHGAP8P85298 464 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 KDSRQ06136 332 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 ACSBG2Q5FVE4 666 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 AFMIDQ63HM1 303 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 RFWD3Q6PCD5 774 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 ZYG11AQ6WRX3 759 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 ZC3HC1Q86WB0 502 aaKnown RBP18.37■□□□□ 0.53
CD40-201ENST00000372276 KIRREL3Q8IZU9 778 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 NETO2Q8NC67 525 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 CALML6Q8TD86 181 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 PDCD6IPQ8WUM4 868 aaKnown RBP18.37■□□□□ 0.53
CD40-201ENST00000372276 FAM161BQ96MY7 647 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 ZNF570Q96NI8 536 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 ZNF395Q9H8N7 513 aaPredicted RBP18.37■□□□□ 0.53
CD40-201ENST00000372276 OXSMQ9NWU1 459 aa18.37■□□□□ 0.53
CD40-201ENST00000372276 GOLGA8QA0A0J9YX86 632 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 GOLGA8OA6NCC3 632 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 GOLGA8NF8WBI6 632 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 G3V2L1 256 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 DFFAO00273 331 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 NVLO15381 856 aaKnown RBP18.36■□□□□ 0.53
CD40-201ENST00000372276 PAGE1O75459 146 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 DDHD2O94830 711 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 POMCP01189 267 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 IGFBP6P24592 240 aaPredicted RBP18.36■□□□□ 0.53
CD40-201ENST00000372276 GRIK1P39086 918 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 AFF1P51825 1210 aaKnown RBP18.36■□□□□ 0.53
CD40-201ENST00000372276 ACTR3P61158 418 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 AP2B1P63010 937 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 YWHAHQ04917 246 aaPredicted RBP18.36■□□□□ 0.53
CD40-201ENST00000372276 RCN1Q15293 331 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 MUM1Q2TAK8 710 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 LIPMQ5VYY2 423 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 EPGNQ6UW88 154 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 CD300LGQ6UXG3 332 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 SETD3Q86TU7 594 aaPredicted RBP18.36■□□□□ 0.53
CD40-201ENST00000372276 MON1AQ86VX9 555 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 ARHGAP12Q8IWW6 846 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 ULK2Q8IYT8 1036 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 CNTD1Q8N815 330 aa18.36■□□□□ 0.53
CD40-201ENST00000372276 RTL3Q8N8U3 475 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms