RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 EIF3BP55884 814 aaKnown RBP12.32□□□□□ -0.44
USF1-203ENST00000368021 YBEYP58557 167 aaPredicted RBP12.32□□□□□ -0.44
USF1-203ENST00000368021 IFI35P80217 286 aaPredicted RBP12.32□□□□□ -0.44
USF1-203ENST00000368021 CYP4F8P98187 520 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 SMAD4Q13485 552 aaKnown RBP12.32□□□□□ -0.44
USF1-203ENST00000368021 CBX2Q14781 532 aaPredicted RBP12.32□□□□□ -0.44
USF1-203ENST00000368021 PARP6Q2NL67 630 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 PARP15Q460N3 678 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 CCDC38Q502W7 563 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 TTC39BQ5VTQ0 682 aaPredicted RBP12.32□□□□□ -0.44
USF1-203ENST00000368021 DENND2CQ68D51 928 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 TFAP2DQ7Z6R9 452 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 LGI2Q8N0V4 545 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 PDIK1LQ8N165 341 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 MCUQ8NE86 351 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 ADAMTS19Q8TE59 1207 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 SH3GL2Q99962 352 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 PIDD1Q9HB75 910 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 EIF2B3Q9NR50 452 aaKnown RBP12.32□□□□□ -0.44
USF1-203ENST00000368021 SEPT10Q9P0V9 454 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 ZMYM5Q9UJ78 669 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 PLAAQ9Y263 795 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 ZNF510Q9Y2H8 683 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 CPQQ9Y646 472 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 NFS1Q9Y697 457 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 CHD5Q8TDI0 1954 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 DOCK6Q96HP0 2047 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 A0A1W2PRU2 124 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 TCRBV7S3A2A0A539 114 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 ARHGAP42A6NI28 874 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 MATN3O15232 486 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 ALOX15BO15296 676 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 OPA1O60313 960 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 GREM1O60565 184 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 CLDN11O75508 207 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 CKMP06732 381 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 APRTP07741 180 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 MYL4P12829 197 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 MAGEA4P43358 317 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 CDH4P55283 916 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 SMAD2Q15796 467 aaKnown RBP12.32□□□□□ -0.44
USF1-203ENST00000368021 ATAT1Q5SQI0 421 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 ITPRIPL1Q6GPH6 555 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 Q6ZNB5 142 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 CHST9Q7L1S5 443 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 FAM217AQ8IXS0 508 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 N4BP2L2Q92802 583 aaPredicted RBP12.32□□□□□ -0.44
USF1-203ENST00000368021 TEKT5Q96M29 485 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 PWWP2AQ96N64 755 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 TTC25Q96NG3 672 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 SMPD4Q9NXE4 827 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 KLHL8Q9P2G9 620 aaPredicted RBP12.32□□□□□ -0.44
USF1-203ENST00000368021 NCOR1O75376 2440 aa12.32□□□□□ -0.44
USF1-203ENST00000368021 RAMP2O60895 175 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 COQ9O75208 318 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 RHOP08100 348 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 IRF1P10914 325 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 CCNB1P14635 433 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 OR1E1P30953 314 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 PAPOLAP51003 745 aaKnown RBP12.31□□□□□ -0.44
USF1-203ENST00000368021 ZXDBP98169 803 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 SLC29A2Q14542 456 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 ANO4Q32M45 955 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 RFWD3Q6PCD5 774 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 PID1Q7Z2X4 250 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 SHKBP1Q8TBC3 707 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 DEPDC1BQ8WUY9 529 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 SMG7Q92540 1137 aaKnown RBP12.31□□□□□ -0.44
USF1-203ENST00000368021 MAML1Q92585 1016 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 MYEOVQ96EZ4 313 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 IL12RB2Q99665 862 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 PRKD2Q9BZL6 878 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 GBA3Q9H227 469 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 POMKQ9H5K3 350 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 SAYSD1Q9NPB0 183 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 HCFC1R1Q9NWW0 138 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 DNMT3BQ9UBC3 853 aaKnown RBP12.31□□□□□ -0.44
USF1-203ENST00000368021 IPO11Q9UI26 975 aaKnown RBP12.31□□□□□ -0.44
USF1-203ENST00000368021 LSM7Q9UK45 103 aaKnown RBP12.31□□□□□ -0.44
USF1-203ENST00000368021 ARHGAP26Q9UNA1 814 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 ZFP37Q9Y6Q3 630 aaPredicted RBP12.31□□□□□ -0.44
USF1-203ENST00000368021 NYNRINQ9P2P1 1898 aaKnown RBP12.31□□□□□ -0.44
USF1-203ENST00000368021 BDP1A6H8Y1 2624 aa12.31□□□□□ -0.44
USF1-203ENST00000368021 NOTCH4Q99466 2003 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 A0A1B0GVM2 712 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 TCAF2A6NFQ2 919 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 ERI2A8K979 691 aaKnown RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 RASA4BC9J798 803 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 E7EVH7 732 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 GOLGA8MH3BSY2 632 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 GFRA2O00451 464 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 RASA4O43374 803 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 SNUPNO95149 360 aaKnown RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 SYF2O95926 243 aaKnown RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 ABHD2P08910 425 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 CCR2P41597 374 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 PDIA2Q13087 525 aaKnown RBP12.3□□□□□ -0.44
USF1-203ENST00000368021 ZBTB17Q13105 803 aa12.3□□□□□ -0.44
USF1-203ENST00000368021 POLD3Q15054 466 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms