RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 GAD2Q05329 585 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 USP4Q13107 963 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 CRYMQ14894 314 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 RABGAP1LQ5R372 815 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 ANKRD20A2Q5SQ80 823 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 ANKRD20A1Q5TYW2 823 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 ANKRD20A3Q5VUR7 823 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 ANKRD22Q5VYY1 191 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 IZUMO3Q5VZ72 239 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 RNF43Q68DV7 783 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 CXorf57Q6NSI4 855 aaKnown RBP15.01□□□□□ -0.01
CXCL12-201ENST00000343575 ZNF567Q8N184 647 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 CPXM2Q8N436 756 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 WFDC5Q8TCV5 224 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 FGF13Q92913 245 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 PWWP2AQ96N64 755 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 LINC00597Q9H2U6 94 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 PPANQ9NQ55 473 aaKnown RBP15.01□□□□□ -0.01
CXCL12-201ENST00000343575 LSM7Q9UK45 103 aaKnown RBP15.01□□□□□ -0.01
CXCL12-201ENST00000343575 CLEC4EQ9ULY5 219 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 TBC1D30Q9Y2I9 924 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 SPTBN5Q9NRC6 3674 aaKnown RBP15.01□□□□□ -0.01
CXCL12-201ENST00000343575 A0A0A0MRY4 1105 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 A0A1B0GVM2 712 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 TCAF2A6NFQ2 919 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 J3KR12 359 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 CLDN11O75508 207 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 POU3F3P20264 500 aaPredicted RBP15□□□□□ -0.01
CXCL12-201ENST00000343575 CCNCP24863 283 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 WEE1P30291 646 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 CD68P34810 354 aaPredicted RBP15□□□□□ -0.01
CXCL12-201ENST00000343575 ACVRL1P37023 503 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 NUMBP49757 651 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 ZNF33AQ06730 810 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 ZNF844Q08AG5 666 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 COL19A1Q14993 1142 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 FSCBQ5H9T9 825 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 CHST9Q7L1S5 443 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 CNTD1Q8N815 330 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 NAT8LQ8N9F0 302 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 TMA16Q96EY4 203 aaKnown RBP15□□□□□ -0.01
CXCL12-201ENST00000343575 SPATA13Q96N96 652 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 DDX50Q9BQ39 737 aaKnown RBP15□□□□□ -0.01
CXCL12-201ENST00000343575 GORASP1Q9BQQ3 440 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 RETREG1Q9H6L5 497 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 CD248Q9HCU0 757 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 PAK5Q9P286 719 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 ZMYM5Q9UJ78 669 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 TPX2Q9ULW0 747 aaKnown RBP15□□□□□ -0.01
CXCL12-201ENST00000343575 ZNF510Q9Y2H8 683 aa15□□□□□ -0.01
CXCL12-201ENST00000343575 NUP210Q8TEM1 1887 aaPredicted RBP15□□□□□ -0.01
CXCL12-201ENST00000343575 TBL1XO60907 577 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 FSHRP23945 695 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 HOXD9P28356 352 aaPredicted RBP14.99□□□□□ -0.01
CXCL12-201ENST00000343575 HPDP32754 393 aaPredicted RBP14.99□□□□□ -0.01
CXCL12-201ENST00000343575 CHKAP35790 457 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 SERINC3Q13530 473 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 SLMAPQ14BN4 828 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 POLD3Q15054 466 aaPredicted RBP14.99□□□□□ -0.01
CXCL12-201ENST00000343575 FAM78AQ5JUQ0 283 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 FAXCQ5TGI0 409 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 HOOK3Q86VS8 718 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 ATPAF2Q8N5M1 289 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 ANKS4BQ8N8V4 417 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 TDRD5Q8NAT2 981 aaKnown RBP14.99□□□□□ -0.01
CXCL12-201ENST00000343575 ARHGEF2Q92974 986 aaKnown RBP14.99□□□□□ -0.01
CXCL12-201ENST00000343575 TXLNGYQ9BZA5 131 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 ETNK1Q9HBU6 452 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 SEPT10Q9P0V9 454 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 IPO11Q9UI26 975 aaKnown RBP14.99□□□□□ -0.01
CXCL12-201ENST00000343575 TMEM265A0A087WTH1 108 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 MATN3O15232 486 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 RAMP2O60895 175 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 HOXB8P17481 243 aaPredicted RBP14.99□□□□□ -0.01
CXCL12-201ENST00000343575 VIPR2P41587 438 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 YBEYP58557 167 aaPredicted RBP14.99□□□□□ -0.01
CXCL12-201ENST00000343575 GNA12Q03113 381 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 KCNJ11Q14654 390 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 PARP15Q460N3 678 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 TEX44Q53QW1 395 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 TPGS1Q6ZTW0 290 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 LRRC49Q8IUZ0 686 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 OR7D4Q8NG98 312 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 PRCCQ92733 491 aaPredicted RBP14.99□□□□□ -0.01
CXCL12-201ENST00000343575 BHMTQ93088 406 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 LRCH3Q96II8 777 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 ASB16Q96NS5 453 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 IL12RB2Q99665 862 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 PLK2Q9NYY3 685 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 ANAPC5Q9UJX4 755 aa14.99□□□□□ -0.01
CXCL12-201ENST00000343575 ZBTB24O43167 697 aaPredicted RBP14.98□□□□□ -0.01
CXCL12-201ENST00000343575 MGRN1O60291 552 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 TMEM63AO94886 807 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 JCHAINP01591 159 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 CCNB1P14635 433 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 CALRP27797 417 aaKnown RBP14.98□□□□□ -0.01
CXCL12-201ENST00000343575 SCTRP47872 440 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 CALCOCO2Q13137 446 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 RIPK1Q13546 671 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 SYCP2LQ5T4T6 812 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms